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Series GSE151753 Query DataSets for GSE151753
Status Public on Sep 26, 2022
Title Characterization of the role of RBFOX2 in the liver
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Here we investigate the role of the splicing factor RBFOX2 in the liver. Our work describes a new regulatory mechanism where RBFOX2 controls cholesterol level, by coordinating the inclusion/exclusion of alternatively spliced exons in the liver.

This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
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Submission date Jun 03, 2020
Last update date Sep 28, 2022
Contact name LMS Bioinformatics Core
E-mail(s) bioinformatics@lms.mrc.ac.uk
Organization name MRC London Institute of Medical Sciences
Department Bioinformatics Core
Street address Hammersmith Hospital Campus, Du Cane Road
City London
ZIP/Postal code W12 0NN
Country United Kingdom
 
Platforms (2)
GPL16417 Illumina MiSeq (Mus musculus)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (35)
GSM4589731 eiCLIP_sample1
GSM4589732 eiCLIP_sample2
GSM4589733 eiCLIP_sample3
This SuperSeries is composed of the following SubSeries:
GSE151747 eiCLIP analysis of RBFOX2 in primary mouse hepatocytes
GSE151748 RNAseq of livers from WT mice or livers with Rbfox2 knockout fed CD
GSE151750 RNAseq of liver of CD and HFD fed mice in fed or fasted conditions
Relations
BioProject PRJNA637088

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE151753_RAW.tar 8.6 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp

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