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Series GSE151593 Query DataSets for GSE151593
Status Public on Nov 06, 2020
Title RNAseq of splenic dendritic cells from 1 week-old and adult Clec9a-Cre Rosa-Tomato mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We use bulk RNA sequencing of sorted cells to characterize the gene expression profiles of splenic TOM+ cDC2 and TOM- DC2 from 1 week-old mice as well and of TOM+ cDC2 from adult mice. We aim to reveal transcriptional differences based on ontogeny and developmental age. Sequencing results revealed that the developmental age rather than cell origin is a major determinantof the transcriptomic differences observed between young and adult cDC2.
Overall design RNA sequencing of murine dendritic cell population from the spleen
Contributor(s) Papaioannou NE, Schraml BU
Citation(s) 33469015
Submission date Jun 01, 2020
Last update date Jan 26, 2021
Contact name Nikolaos Papaioannou
Organization name Biomedical Center
Street address Großhaderner Straße 9
City Planegg-Martinsried
ZIP/Postal code 82152
Country Germany
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (9)
GSM4586392 BS10
GSM4586393 BS12
GSM4586394 BS14
This SubSeries is part of SuperSeries:
GSE151595 Environmental signals rather than layered ontogeny imprint the function of type 2 conventional dendritic cells in young and adult mice
BioProject PRJNA636499
SRA SRP265525

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE151593_RAW.tar 5.5 Mb (http)(custom) TAR (of TAB, TXT)
GSE151593_TPM_all_samples_values.xlsx 1.6 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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