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Series GSE150295 Query DataSets for GSE150295
Status Public on Nov 26, 2020
Title Identification of PAX6 target genes in enteric precursor cells
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary With the aim to elucidate the mechanism underlying the PAX6 role in such processes, we have performed a chromatin immunoprecipitation coupled with massively parallel sequencing (ChIP-Seq) analysis to identify the PAX6 target genes in enteric precursor cells (EPCs) from mice.
Overall design Identification of PAX6 target genes in enteric precursor cells. 16 ChIPs, 16 Inputs and 4 IGG samples were sequenced and analyzed.
Contributor(s) Borrego S, Villalba-Benito L, Torroglosa A
Citation(s) 33260622
Submission date May 11, 2020
Last update date Feb 25, 2021
Contact name Villalba Leticia
Organization name FISEVI
Street address Avda. Manuel Siurot s/n
City Seville
ZIP/Postal code 41013
Country Spain
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (36)
GSM4546380 ChIP-Seq_PAX6_1
GSM4546381 ChIP-Seq_PAX6_2
GSM4546382 ChIP-Seq_PAX6_3
BioProject PRJNA631741
SRA SRP261129

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Supplementary file Size Download File type/resource
GSE150295_Merge_fastq_IGG_peaks.bed.gz 14.4 Kb (ftp)(http) BED
GSE150295_Merge_fastq_Pool1_peaks.bed.gz 7.2 Kb (ftp)(http) BED
GSE150295_Merge_fastq_Pool2_peaks.bed.gz 14.9 Kb (ftp)(http) BED
GSE150295_Merge_fastq_Pool3_peaks.bed.gz 10.6 Kb (ftp)(http) BED
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Raw data are available in SRA
Processed data are available on Series record

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