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Series GSE150029 Query DataSets for GSE150029
Status Public on May 07, 2023
Title Genome-wide gene expression analysis in RAS-mutated cells with EZH2 inactivation
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary EZH2 was inactivated by shRNA in the RAS-mutated HL-60 acute myeloid leukemia cell line. RNA-seq genome wide expression profiling was used to screen for genes deregulated by EZH2 inactivation within this setting.
Overall design Differential expression analysis of three EZH2 shRNA knock-out cell lines and three scrambled control shRNA cell lines in a HL-60 background.
Contributor(s) Zebisch A
Citation(s) 33589750
Submission date May 07, 2020
Last update date Sep 18, 2023
Contact name Armin Zebisch
Organization name Medical University of Graz
Department Division of Hematology
Street address Auenbruggerplatz 38
City Graz
State/province Styria
ZIP/Postal code 8036
Country Austria
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (6)
GSM4520984 HL_60_CTRL_3_S60871
GSM4520985 HL_60_CTRL_4_S60872
GSM4520986 HL_60_CTRL_5_S60867
BioProject PRJNA630966
SRA SRP260421

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Supplementary file Size Download File type/resource
GSE150029_rnaseq_deseq_global_counts_raw.tsv.gz 1.5 Mb (ftp)(http) TSV
GSE150029_rnaseq_deseq_global_fpkms.tsv.gz 2.5 Mb (ftp)(http) TSV
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Raw data are available in SRA
Processed data are available on Series record

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