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| Status |
Public on Jun 30, 2020 |
| Title |
Transcriptomic responses to a live-attenuated Francisella tularensis vaccine |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Impact of live attenuated F. tularensis vaccine (DVC-LVS) on PBMC poly(A)-RNA expresssion in 10 subjects over time (Days 1, 2 ,7, and 14 post-vaccination) relative to pre-vaccination (Day 0).
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| Overall design |
PBMC aliquots from ten subjects, 5 time points per subject (pre-vaccination at Day 0, and post-vaccination at Days 1, 2, 7, 14) were assayed using RNA-Seq by two sequencing cores (Emory and St. Louis University).
>>> The submitter declares that the raw data cannot be made available via any mechanism due to patient privacy concerns. <<<
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| Contributor(s) |
Goll JB, Li S, Edwards JL, Bosinger S, Jensen TL, Wang Y, Hooper WF, Gelber CE, Sanders KL, Anderson EJ, Rouphael N, Natrajan MS, Johnson R, Sanz P, Hoft D, Mulligan M |
| Citation(s) |
32722194, 32722207, 36741404 |
| Submission date |
May 04, 2020 |
| Last update date |
Feb 10, 2023 |
| Contact name |
Johannes Goll |
| Organization name |
The Emmes Company
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| Department |
Bioinformatics Service Group
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| Street address |
401 N Washington St
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| City |
Rockville |
| State/province |
MD |
| ZIP/Postal code |
20850 |
| Country |
USA |
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| Platforms (1) |
| GPL21290 |
Illumina HiSeq 3000 (Homo sapiens) |
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| Samples (100)
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| Relations |
| BioProject |
PRJNA630207 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE149809_fragment_count_matrix.csv.gz |
4.0 Mb |
(ftp)(http) |
CSV |
| Raw data not provided for this record |
| Processed data are available on Series record |
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