GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE149809 Query DataSets for GSE149809
Status Public on Jun 30, 2020
Title Transcriptomic responses to a live-attenuated Francisella tularensis vaccine
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Impact of live attenuated F. tularensis vaccine (DVC-LVS) on PBMC poly(A)-RNA expresssion in 10 subjects over time (Days 1, 2 ,7, and 14 post-vaccination) relative to pre-vaccination (Day 0).
Overall design PBMC aliquots from ten subjects, 5 time points per subject (pre-vaccination at Day 0, and post-vaccination at Days 1, 2, 7, 14) were assayed using RNA-Seq by two sequencing cores (Emory and St. Louis University).

>>> The submitter declares that the raw data cannot be made available via any mechanism due to patient privacy concerns. <<<
Contributor(s) Goll JB, Li S, Edwards JL, Bosinger S, Jensen TL, Wang Y, Hooper WF, Gelber CE, Sanders KL, Anderson EJ, Rouphael N, Natrajan MS, Johnson R, Sanz P, Hoft D, Mulligan M
Citation(s) 32722194, 32722207, 36741404
Submission date May 04, 2020
Last update date Feb 10, 2023
Contact name Johannes Goll
Organization name The Emmes Company
Department Bioinformatics Service Group
Street address 401 N Washington St
City Rockville
State/province MD
ZIP/Postal code 20850
Country USA
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (100)
GSM4513435 EMORY Subject A Day 00
GSM4513436 EMORY Subject A Day 01
GSM4513437 EMORY Subject A Day 02
BioProject PRJNA630207

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149809_fragment_count_matrix.csv.gz 4.0 Mb (ftp)(http) CSV
Raw data not provided for this record
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap