NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE14940 Query DataSets for GSE14940
Status Public on Oct 01, 2009
Title Brugia malayi mature vs immature microfilariae
Organism Brugia malayi
Experiment type Expression profiling by array
Summary Filarial nematodes are arthropod-borne nematodes that cause a variety of economically important diseases such as onchocerciasis (river blindness), lymphatic filariasis, and heartworm disease. The most widespread filarial disease of humans is lymphatic filariasis, caused by worms in the genera Wuchereria and Brugia. Lymphatic filariasis is an economic and social burden in endemic countries and affects approximately 119 million people worldwide (Michael, 1997). In humans, the worms live in and block the lymph vessels, causing improper flow of lymph, and inflammation of the lymphatic system. The symptoms are fever, swollen limbs and genitals, generalized malaise, and can progress to a debilitating condition known as elephantiasis

This research focuses on the transmission of these worms to the disseminating mosquito host, and it is based on the interesting observation that mf must be at least 7 days old to successfully infect the mosquito (de Hollanda, 1982). Newborn mf that have not ‘matured’ cannot successfully penetrate the midgut of the mosquito, and subsequently cannot develop to the L3 stage (Fuhrman, 1987). Previous work done by another group 20 years ago suggests that the molecular makeup of the worm surface changes during this maturation process (Furman, 1983 a and b). We used microarray analysis to characterize changes in gene expression that take place during the mf maturation process. Understanding the gene expression changes that occur as the mf mature will allow us to understand the nature of the philological transition that allows mf to move from the human to the mosquito host. With this information in hand, we can eventually identify parasite molecules that could be targeted to either stop parasite reproduction or prevent transmission of the mf to the mosquito. This would stop parasite transmission in endemic areas.
 
Overall design Two biological replicates were performed each with two technical replicates.
 
Contributor(s) Griffiths K, Mayhew G, Zink R, Erickson S, Fuchs J, Christensen B, McDermott C, Michalski M
Citation(s) 19894065
Submission date Feb 20, 2009
Last update date Mar 21, 2012
Contact name Kathryn Griffiths
E-mail(s) griffiths.kathryn@gmail.com
Organization name University of Wisconsin Oshkosh
Department Biology and Microbiology
Lab Michalski
Street address 800 Algoma Blvd
City Oshkosh
State/province WI
ZIP/Postal code 54901
Country USA
 
Platforms (1)
GPL8207 Washington University School of Medicine Microarray Core Brugia malayi microarray V.2
Samples (4)
GSM372523 Brugia malayi mature mf vs immature mf slide #39
GSM373265 Brugia malayi mature mf vs immature mf slide #40
GSM373266 Brugia malayi mature mf vs immature mf slide #41
This SubSeries is part of SuperSeries:
GSE15017 Mature vs immature microfilariae
Relations
BioProject PRJNA123193

differentially expressed transcripts header descriptions
ID_REF
VALUE normalized ratio (mature/immature)
t-test p-value

Data table
ID_REF VALUE t-test p-value
AA056807 0.0359 0.00000800
BMC00522 0.0398 0.00000146
14294.m00131 0.042 0.00000182
15375.m00008 0.0505 0.00001480
BMB_gene_11.564 0.0549 0.00002110
WB-contig_267 0.0556 0.00008090
14274.m00231 0.0564 0.00007870
13156.m00099 0.0766 0.00000173
TC9567 0.0788 0.00000690
AA545881 0.154 0.00000382
BMC11770 0.156 0.00010400
BMB_gene_55.331 0.156 0.00000349
AA991131 0.18 0.00007050
BMC00805 0.184 0.00010800
14046.m00189 0.191 0.00000810
14824.m00117 0.192 0.00000615
13830.m00006 0.245 0.00008370
14952.m01375 0.249 0.00007680
14824.m00118 0.249 0.00008340
BMC00873 0.263 0.00010100

Total number of rows: 43

Table truncated, full table size 1 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE14940_RAW.tar 16.1 Mb (http)(custom) TAR (of CSV)
GSE14940_README_qPCR_upload.txt 2.3 Kb (ftp)(http) TXT
GSE14940_qPCR_probe_primer_upload.txt.gz 652 b (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap