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Series GSE147884 Query DataSets for GSE147884
Status Public on Aug 11, 2021
Title RNA transcriptome analyses in shcontrol, shMETTL3, shMETTL3-resistant METTL3 wildtype and catalytically dead mutant LNCaP cells.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the role of METTL3-mediated m6A modification, we performed transcriptome profiling by high throughput sequencing.
Overall design Total RNA etraction followed by high throughput sequencing (RNA-seq) in shControl, shMETTL3, shMETTL3-resistant METTL3 wildtype and mutant (catalytically dead) stable LNCaP cell lines
Contributor(s) Zhang Z, Lee J, Xu K
Citation(s) 34321211
Submission date Apr 01, 2020
Last update date Aug 11, 2021
Contact name Kexin Xu
Organization name UT Health Science Center at San Antonio
Department Molecular Medicine
Street address 7703 Floyd Curl, MC 8257
City San Antonio
State/province Texas
ZIP/Postal code 78229
Country USA
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (8)
GSM4447777 shCtrl_vector_rep1
GSM4447778 shCtrl_vector_rep2
GSM4447779 shMETTL3_MT_rep1
This SubSeries is part of SuperSeries:
GSE147891 human prostate cell lines
BioProject PRJNA622481
SRA SRP254897

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE147884_Counts.txt.gz 392.5 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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