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Series GSE147828 Query DataSets for GSE147828
Status Public on Dec 01, 2022
Title miRNA profiling of mouse motor neuron during development
Organism Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary We profiled miRNAs from embryonic stem cells to motor neurons derived via RA (retinoic acid) and distinguished different developmental stages by days. Those developmental stages are ESC, Day2, Day3, Day4, and both motor neuron and interneuron with day7. We also provide the fractionated nuclear and cytoplasm miRNA profiling with motor neuron and interneuron respectivey.
Overall design MiRNA profiling from total RNAs extracted from mouse motor neuron and interneuron during development. The reference BioProject accession is PRJNA615782 with 17 sequence data (SRAs).
Contributor(s) Chen J, Hung J
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BioProject PRJNA615782
Submission date Mar 31, 2020
Last update date Dec 03, 2022
Contact name Joye Li
Organization name National Chiao Tung University
Street address 1001 University Road
City Hsinchu
ZIP/Postal code 300
Country Taiwan
Platforms (2)
GPL16417 Illumina MiSeq (Mus musculus)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (17)
GSM4446572 ESC
GSM4446573 ESC-derived MN Day 2 replicate 1
GSM4446574 ESC-derived MN Day 2 replicate 2
SRA SRP254252

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE147828_RAW.tar 144.5 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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