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Series GSE146042 Query DataSets for GSE146042
Status Public on Aug 24, 2020
Title WT colonic scRNA-seq experiment [re-analysis]
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The GSE114044 data was re-mapped and re-analyzed. Duplicated sample records were created for the convenient retrieval of the complete raw data from SRA.
Overall design 3 colon from different WT mice in single sequencing run;
Contributor(s) Lau K, Simmons AJ
Citation(s) 32828819
Submission date Feb 27, 2020
Last update date Aug 29, 2020
Contact name Ken Lau
Phone 6159366859
Organization name Vanderbilt University
Department Cell and Developmental Biology
Street address 2215 Garland Ave. MRBIV10475
City Nashville
State/province TN
ZIP/Postal code 37232
Country USA
Platforms (2)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL19415 Illumina NextSeq 500 (Homo sapiens; Mus musculus)
Samples (3)
GSM4363333 323_colon1 [re-analysis]
GSM4363334 323_colon2 [re-analysis]
GSM4363335 323_colon3 [re-analysis]
This SubSeries is part of SuperSeries:
GSE145830 Ileal single-cell analysis in the context of inflammation focused on tuft cells
BioProject PRJNA609108
SRA SRP250957

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE146042_RAW.tar 9.8 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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