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| Status |
Public on Jul 20, 2020 |
| Title |
Identification of active gene regulatory elements in the human and murine TBX3 locus |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Other
|
| Summary |
The human and murine TBX3 locus harbors hundreds of active regulatory elements responding to Smad-/Gata- and Tcf-transcription factors in vitro.
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| |
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| Overall design |
STARR-seq with the entire human and murine TBX3 locus as input, transfected in replicate experiments in COS7 cells and co-transfected with pcDNA (ctrl), Smad- and Gata factors (SG4) or Tcf factors (Wnt).
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| |
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| Contributor(s) |
van Weerd JH, van Duijvenboden K, Christoffels VM |
| Citation(s) |
32672536 |
| |
| Submission date |
Feb 13, 2020 |
| Last update date |
Jul 20, 2020 |
| Contact name |
Vincent M. Christoffels |
| E-mail(s) |
v.m.christoffels@amsterdamumc.nl
|
| Phone |
0205667821
|
| Organization name |
Amsterdam UMC
|
| Department |
Medical Biology
|
| Lab |
Vincent Christoffels
|
| Street address |
Meibergdreef 15 K2-159
|
| City |
Amsterdam |
| State/province |
N/A (NA) |
| ZIP/Postal code |
1105 AZ |
| Country |
Netherlands |
| |
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| Platforms (2) |
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| Samples (19)
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| Relations |
| BioProject |
PRJNA606524 |
| SRA |
SRP249324 |
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