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Series GSE144700 Query DataSets for GSE144700
Status Public on Feb 04, 2020
Title Serine/Threonine phosphatase PP2A is essential for optimal B cell function
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Protein phosphatase 2A (PP2A), a serine/threonine phosphatase, has been shown to control T cell function. We found that in vitro activated B cells and B cells from various lupus-prone mice and patients with systemic lupus erythematosus display increased PP2A activity. To understand the contribution of PP2A to B cell function, we generated a Cd19CrePpp2r1aflox/flox (flox/flox) mouse which lacks functional PP2A only in B cells. Flox/flox mice displayed reduced spontaneous germinal center formation and decreased responses to T-dependent and T-independent antigens while their B cells responded poorly in vitro to stimulation with an anti-CD40 antibody or CpG in the presence of IL-4. Transcriptome and metabolome studies revealed altered NAD and purine/pyrimidine metabolism and increased expression of purine nucleoside phosphorylase in PP2A-deficient B cells. Our results demonstrate that PP2A is required for optimal B cell function and may contribute to increased B cell activity in systemic autoimmunity.
 
Overall design Examination of gene expression in B cells from 1) wild-type mice 2) B cell-specific PP2Aa-deficient mice
 
Contributor(s) Tsokos GC, Li H
Citation(s) 32161189
Submission date Feb 03, 2020
Last update date Apr 13, 2020
Contact name George C Tsokos
E-mail(s) gtsokos@bidmc.harvard.edu
Phone (617) 632-8658
Organization name Harvard Medical School
Department Rheumatology/BIDMC
Street address CLS-928, 3 Blackfan Circle
City Boston
State/province Massachusetts
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (6)
GSM4293998 WT B cells [000008518869_B11]
GSM4293999 WT B cells [000008518869_B12]
GSM4294000 WT B cells [000008518869_C01]
Relations
BioProject PRJNA604601
SRA SRP246937

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE144700_RAW.tar 21.3 Mb (http)(custom) TAR (of CXB)
GSE144700_RNAseq_Esra_Meidan_results.xlsx 1.3 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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