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Status |
Public on Jun 22, 2020 |
Title |
Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [WES] |
Organism |
Homo sapiens |
Experiment type |
Other
|
Summary |
To define the cellular composition and spatial architecture of the tumor micoenvironment, we combined single-cell RNA-sequencing, spatial transcriptomics, and multiplexed ion-beam imaging from 10 patient cutaneous squamous cell carcinoma tumors and site-matched normal skin
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Overall design |
Genomic DNA was isolated from patient tumors and normal skin and whole-exome squencing was performed
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Contributor(s) |
Ji AL, Rubin AJ |
Citation(s) |
32579974, 38037084 |
|
Submission date |
Jan 24, 2020 |
Last update date |
Dec 13, 2023 |
Contact name |
Andrew Ji |
E-mail(s) |
andrew.ji@mssm.edu
|
Organization name |
Icahn School of Medicine at Mount Sinai
|
Street address |
1428 Madison Ave.
|
City |
New York |
State/province |
NY |
ZIP/Postal code |
10029 |
Country |
USA |
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Platforms (1) |
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Samples (18)
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This SubSeries is part of SuperSeries: |
GSE144240 |
Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma |
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Relations |
BioProject |
PRJNA603106 |
SRA |
SRP265179 |