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Series GSE142147 Query DataSets for GSE142147
Status Public on Dec 17, 2019
Title Transcriptional profiling of neurons in the subthalamic nucleus in a Cbln2-TRAP (NIDA176) mouse line
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary TRAP translational profiling is a method that allows investigators to genetically characterize specific cell types in complex tissues such as mouse brain. Using this technique we obtained RNA-Seq data from actively translating transcripts present in neurons in the subthalamic nucleus of adult Cbln2-EGFP/Rpl10a (NIDA176) BAC transgenic mice.
Overall design TRAP-Seq of neurons in the subthalamic nucleus of seven adult Cbln2-EGFP/Rpl10a (NIDA176) mice
Contributor(s) Wang C
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NIH grant(s)
Grant ID Grant title Affiliation Name
P30 DA035756 Molecular Definition of Brain Circuits Controlling Addiction THE ROCKEFELLER UNIVERSITY NATHANIEL HEINTZ
Submission date Dec 16, 2019
Last update date Dec 21, 2019
Contact name Laura Kus
Phone 2123278235
Organization name The Rockefeller University
Department Heintz Laboratory
Street address 1230 York Avenue # 260
City New York
State/province NY
ZIP/Postal code 10065-6307
Country USA
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (1)
GSM4221503 Cbln2-EGFP/Rpl10a (NIDA176) subthalamic nucleus IP [2471]
BioProject PRJNA595979
SRA SRP237806

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE142147_RAW.tar 130.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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