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Series GSE141552 Query DataSets for GSE141552
Status Public on Apr 14, 2020
Title Single cell transcriptome profiling of the human alcohol-dependent brain samples.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Over 16,000 nuclei were isolated from human postmartum brain frozen prefrontal cortex samples of alcoholic and control individuals. Libraries were prepared with 10X Genomics platform and sequenced using NovaSeq 6000.
Overall design Single nucleus RNA sequencing (snRNA-seq) from prefrontal cortex of 3 alcoholic and 4 control individuals.
Contributor(s) Brenner E, Tiwari GR, Liu Y, Brock A, Mayfield RD
Citation(s) 32142123
Submission date Dec 05, 2019
Last update date Sep 01, 2020
Contact name Gayatri Tiwari
Organization name University of Texas at Austin
Street address 2500 Speedway
City Austin
State/province TX
ZIP/Postal code 78717
Country USA
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (8)
GSM4206900 Alcohol_07
GSM4206901 Alcohol_14
GSM4206902 Alcohol_23
BioProject PRJNA593861
SRA SRP234920

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Supplementary file Size Download File type/resource
GSE141552_RAW.tar 615.1 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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