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Series GSE141209 Query DataSets for GSE141209
Status Public on Jun 02, 2020
Title Analysis of Retinoblastoma Transcriptome
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In this data, we examined Transcriptome detection and expression in 8 samples of Retinoblastoma. We found a central core shared by all samples .
We used exon arrays to find a detected and undetected transcripts and genes in Retinoblastoma and we compared unilateral and bilateral samples.
Overall design The samples were obtained from the eight enucleated eyes from patients with retinoblastoma with no chemotherapy treatment.Tumors were cultured for a week in the RPMI medium with 12% FBS and the extraction of RNA from the primary cultures was performed with TRIzol protocol.
Contributor(s) Alvarez-Suarez DE, Ponce-CastaƱeda MV, Tovar H, Hernandez-Lemus E
Citation(s) 32474753
Submission date Nov 30, 2019
Last update date Jun 08, 2020
Contact name Diana Emilce Alvarez Suarez
Organization name hospital de pediatria CMNSXXI
Department Unidad de Investigacion Medica Enf. Infecciosas
Street address Av cuautemoc 330
City Mexico City
State/province Mexico
ZIP/Postal code 06720
Country Mexico
Platforms (1)
GPL17585 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [probe set (exon) version]
Samples (8)
GSM4197220 Retinoblastoma_1_Hta2_0_exon_level
GSM4197221 Retinoblastoma_2_Hta2_0_exon_level
GSM4197222 Retinoblastoma_3_Hta2_0_exon_level
BioProject PRJNA592626

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE141209_RAW.tar 263.6 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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