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Series GSE141172 Query DataSets for GSE141172
Status Public on Oct 26, 2023
Title Amplification of Oocytes through Parthenogenesis [RRBS]
Organism Mus musculus
Experiment type Methylation profiling by high throughput sequencing
Summary We asked whether oocyte number could be amplified through parthenogenesis of mouse oocytes, without requiring creation of a paternal genome and a genetically unique genome. Parthenotes develop to a blastocyst-like stage, and from this parthenogenetic ESCs (pESCs) can be derived with high efficiency. Like ESCs, pESCs maintain unlimited self-renewal and pluripotency, as well as germline competence. Further, we demonstrate that their expression pattern of imprinted maternal genes resembles that observed in oocytes. pESCs can be directed to differentiate into primordial germ cell-like cells (PGCLCs) and form oocytes that produce fertile pups and reconstitute ovarian endocrine functions. The transcriptome and imprinting pattern of PGCLCs differentiated from pESCs more closely approximate those of in vivo produced embryonic PGCs, than PGCLCs produced from ESCs. Parthenogenesis offers a promising route for deriving PGCLCs and amplifying oocytes by faithfully maintaining maternal genes, without fertilization.
 
Overall design We performed RRBS assay to analysis the DNA methylation between female ESC and pESC, and also analysis the DNA methylation among PGC, female ESC-PGCLC and pESC-PGCLCs
 
Contributor(s) Tian C
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Submission date Nov 29, 2019
Last update date Oct 26, 2023
Contact name Chenglei Tian
E-mail(s) chenglei.tian@helmholtz-munich.de
Organization name Helmholtz Munich
Lab Instirution of translational stem cell research
Street address Ingolstädter Landstraße 1
City Munich
ZIP/Postal code 85764
Country Germany
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (5)
GSM4196524 RRBS_Female ESC
GSM4196525 RRBS_pESC
GSM4196526 RRBS_PGC
Relations
BioProject PRJNA592530
SRA SRP234026

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE141172_RAW.tar 26.9 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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