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Series GSE140623 Query DataSets for GSE140623
Status Public on Jul 09, 2020
Title Regulated snoRNA expression during differentiation corresponds with a change in ribosomal RNA pseudouridylation and altered pre-ribosomal RNA processing
Organism Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Non-coding RNA profiling by array
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 32710630
Submission date Nov 18, 2019
Last update date Sep 15, 2020
Contact name Kathleen McCann
E-mail(s) kathleen.mccann2@nih.gov
Organization name National Institute of Environmental Health Sciences
Street address 111 TW Alexander Dr
City Durham
State/province NC
ZIP/Postal code 27709
Country USA
 
Platforms (2)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL27649 Nanostring Custom Codeset. Reporter Libraray file id: McCann_SnoRNA_2.rlf
Samples (40)
GSM4146706 mESCs untreated T=0 rep1 (small RNA-seq)
GSM4146707 mESCs untreated T=0 rep2 (small RNA-seq)
GSM4146708 mESCs untreated T=0 rep3 (small RNA-seq)
This SuperSeries is composed of the following SubSeries:
GSE139812 Regulated snoRNA expression during differentiation corresponds with a change in ribosomal RNA pseudouridylation and altered pre-ribosomal RNA processing [RNA-seq and ncRNA-seq]
GSE140618 Regulated snoRNA expression during differentiation corresponds with a change in ribosomal RNA pseudouridylation and altered pre-ribosomal RNA processing [Nano104]
GSE140622 Regulated snoRNA expression during differentiation corresponds with a change in ribosomal RNA pseudouridylation and altered pre-ribosomal RNA processing [Nano77]
Relations
BioProject PRJNA590255

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE140623_RAW.tar 70.0 Kb (http)(custom) TAR (of RCC)
SRA Run SelectorHelp

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