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Series GSE139128 Query DataSets for GSE139128
Status Public on Jul 30, 2022
Title Dominant role of DNA methylation over H3K9me3 for IAP silencing in endoderm
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 36123357
Submission date Oct 20, 2019
Last update date Oct 04, 2022
Contact name Gunnar Schotta
E-mail(s) gunnar.schotta@bmc.med.lmu.de
Phone 089218075422
Organization name LMU Munich
Department Biomedical Center
Street address Grosshaderner Strasse 9
City Planegg-Martinsried
ZIP/Postal code 82152
Country Germany
 
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (104)
GSM4131338 RNA.Setdb1.Embryo.Con.r1
GSM4131339 RNA.Setdb1.Embryo.Con.r2
GSM4131340 RNA.Setdb1.Embryo.Con.r3
This SuperSeries is composed of the following SubSeries:
GSE139126 Dominant role of DNA methylation over H3K9me3 in ERV silencing during embryonic endoderm development [RNA-Seq]
GSE139127 Dominant role of DNA methylation over H3K9me3 in ERV silencing during embryonic endoderm development [ChIP-Seq]
GSE169462 Dominant role of DNA methylation over H3K9me3 in ERV silencing during embryonic endoderm development [RNA-Seq Suv39]
Relations
BioProject PRJNA578551

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE139128_RAW.tar 8.5 Gb (http)(custom) TAR (of BIGWIG, RESULTS, TXT)
SRA Run SelectorHelp

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