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GEO accession:
Series GSE138514
Query DataSets for GSE138514
Status
Public on Apr 25, 2020
Title
A complex regulatory landscape involved in the development of external genitals
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
32301703
Submission date
Oct 07, 2019
Last update date
May 05, 2022
Contact name
Ana Rita Amandio Lhopitallier
E-mail(s)
rita.lhopitallier@epfl.ch
Organization name
EPFL
Department
SV-ISREC-EPFL
Lab
Laboratory of Developmental Genomics
Street address
SV2842, Station 19
City
Lausanne
ZIP/Postal code
CH-1015
Country
Switzerland
Platforms (3)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL21103
Illumina HiSeq 4000 (Mus musculus)
Samples (65)
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GSM4110040
CR_E10_5_WT_Hoxd13VP
GSM4110041
FB_E12_5_WT_GT2VP
GSM4110042
FB_E12_5_WT_Hoxd13VP
GSM4110043
FB_E12_5_WT_islandVVP
GSM4110044
GT_E12_5_WT_GT2VP
GSM4110045
GT_E12_5_WT_Hoxd13VP
GSM4110046
GT_E12_5_WT_islandVVP
GSM4110047
GT_E13_5_InvV_rep1_Hoxd13VP
GSM4110048
GT_E13_5_InvV_rep1_island_IVVP
GSM4110049
GT_E13_5_InvV_rep1_island_VVP
GSM4110050
GT_E13_5_InvV_rep2_Hoxd13VP
GSM4110051
GT_E13_5_InvV_rep2_island_IVVP
GSM4110052
GT_E13_5_InvV_rep2_island_VVP
GSM4110053
GT_E13_5_WT_GT2VP
GSM4110054
GT_E13_5_WT_rep1_Hoxd13VP
GSM4110055
GT_E13_5_WT_rep1_islandVVP
GSM4110056
GT_E13_5_WT_rep1_island_IVVP
GSM4110057
GT_E13_5_WT_rep2_Hoxd13VP
GSM4110058
GT_E13_5_WT_rep2_islandVVP
GSM4110059
GT_E13_5_WT_rep2_island_IVVP
GSM4110060
GT_E13_5_delGT2_rep1_Hoxd13VP
GSM4110061
GT_E13_5_delGT2_rep2_Hoxd13VP
GSM4110062
GT_E13_5_delProx_rep1_Hoxd13VP
GSM4110063
GT_E13_5_delProx_rep2_Hoxd13VP
GSM4110064
GT_E13_5_delV_rep1_Hoxd13VP
GSM4110065
GT_E13_5_delV_rep1_island_IVVP
GSM4110066
GT_E13_5_delV_rep2_Hoxd13VP
GSM4110067
GT_E13_5_delV_rep2_island_IVVP
GSM4110068
GT_E15_5_WT_GT2VP
GSM4110069
GT_E15_5_WT_Hoxd13VP
GSM4110070
GT_E15_5_WT_islandVVP
GSM4110071
GT_E17_5_WT_GT2VP
GSM4110072
GT_E17_5_WT_Hoxd13VP
GSM4110073
GT_E17_5_WT_islandVVP
GSM4110079
CR_E10_5_H3K27ac
GSM4110080
CR_E10_5_H3K27me3
GSM4110081
GT_E13_5_H3K27ac
GSM4110082
GT_E13_5_H3K27me3
GSM4110083
GT_E17_5_H3K27ac
GSM4110084
GT_E17_5_H3K27me3
GSM4110085
GT_E13_5_WT_CTCF
GSM4110086
GT_E13_5_delV_CTCF
GSM4110087
GT_E13_5_Input
GSM4110088
CR_E10_5_WT_CnR_HoxA13
GSM4110089
GT_E13_5_WT_CnR_HoxA13
GSM4110090
GT_E13_5_InvV_CnR_CTCF
GSM4110091
GT_16_5_RNAseq_rep1
GSM4110092
GT_16_5_RNAseq_rep2
GSM4110093
GT_18_5_RNAseq_rep1
GSM4110094
GT_18_5_RNAseq_rep2
GSM4110099
CR_E10_5_WT_ATAC_seq_rep1
GSM4110100
CR_E10_5_WT_ATAC_seq_rep2
GSM4110101
GT_E13_5_WT_ATAC_seq_rep1
GSM4110102
GT_E13_5_WT_ATAC_seq_rep2
GSM4110103
GT_E13_5_WT_ATAC_seq_rep3
GSM4110104
GT_E13_5_delGT2_ATAC_seq_rep1
GSM4110105
GT_E13_5_delGT2_ATAC_seq_rep2
GSM4110106
GT_E13_5_delProx_ATAC_seq_rep1
GSM4110107
GT_E13_5_delProx_ATAC_seq_rep2
GSM4110108
GT_E13_5_delV_ATAC_seq_rep1
GSM4110109
GT_E13_5_delV_ATAC_seq_rep2
GSM4110110
GT_E13_5_invV_ATAC_seq_rep1
GSM4110111
GT_E13_5_invV_ATAC_seq_rep2
GSM4257319
GT_E17_5_WT_ATAC_seq_rep1
GSM4257320
GT_E17_5_WT_ATAC_seq_rep2
This SuperSeries is composed of the following SubSeries:
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More...
GSE138507
A complex regulatory landscape involved in the development of external genitals [4C-seq]
GSE138509
A complex regulatory landscape involved in the development of external genitals [ChIP-Seq]
GSE138510
A complex regulatory landscape involved in the development of external genitals [CnR]
GSE138511
A complex regulatory landscape involved in the development of external genitals [RNA-Seq]
GSE138513
A complex regulatory landscape involved in the development of external genitals [ATAC-Seq]
Relations
BioProject
PRJNA576218
Download family
Format
SOFT formatted family file(s)
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TXT
Supplementary file
Size
Download
File type/resource
GSE138514_RAW.tar
6.7 Gb
(http)
(custom)
TAR (of BED, BEDGRAPH)
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