GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE137804 Query DataSets for GSE137804
Status Public on Sep 18, 2020
Title Transcriptomic Characterization of neuroblastoma by Single Cell RNA Sequencing
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Neuroblastoma (NB) is the most common malignant solid tumor in the abdomen of children, with high degree of malignancy, poor prognosis and unknown pathogenesis. So we aim to investigate intra-tumor heterogeneity of neuroblastoma at single cell resolution.
Overall design Single cell mRNA profiles of sixteen primary tumors from sixteen patients with neuroblastoma, four adrenal tissue and two embryos from six aborted fetus were generated by 10X Genomics plartform, without technical replication, and sequenced by NovaSeq 6000 (Illumina)
Web link
Contributor(s) Dong R, Wang J, Li K, Dong K, Zhan Y, Ye C
Citation(s) 32946775
Submission date Sep 20, 2019
Last update date Mar 12, 2021
Contact name rui Dong
Organization name Department of Pediatric Surgery, Children’s Hospital of Fudan University, and Shanghai Key Laboratory of Birth Defect
Street address 399 Wan Yuan Road
City Shanghai
ZIP/Postal code 201102
Country China
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (22)
GSM4088774 T10
GSM4088775 T19
GSM4088776 T27
BioProject PRJNA573097
SRA SRP222837

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE137804_Adrenal_gland_annotation.csv.gz 274.0 Kb (ftp)(http) CSV
GSE137804_Embryo_annotation.csv.gz 199.7 Kb (ftp)(http) CSV
GSE137804_RAW.tar 610.4 Mb (http)(custom) TAR (of XLS)
GSE137804_tumor_dataset_annotation.csv.gz 843.4 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap