GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE136904 Query DataSets for GSE136904
Status Public on Nov 01, 2019
Title Strand specific Sequencing of myr-Akt1 induced transcriptomes in NSCLC cell lines
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To identify the genes significantly regulated by Akt1 activation in NSCLC, myr-Akt1 stable over-expressed A549, HCC827 cells and control vector cells were constructed. The transcriptomes were analyzed by rRNA-depleted strand specific RNA-seq, and LINC01546 was identified significantly up-regulated in myr-Akt1 A549 and HCC827 cells, as compared to vector cells.
Overall design Transcriptomes profiles of A549-myr-Akt1, A549-vector, HCC827-myr-Akt1 and HCC827-vecotr were generated by Illumina NovaSeq 6000.
Contributor(s) Tian H, Wu X, Cai J
Citation(s) 33046716
Submission date Sep 05, 2019
Last update date Oct 27, 2020
Contact name Han Tian
Phone 86-20-87333587
Organization name Sun Yat-sen University
Department Zhongshan School of Medicine
Street address No.74, Zhongshan Er Road
City Guangzhou
State/province Guangdong
ZIP/Postal code 510080
Country China
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (4)
GSM4061724 A549_AKT1
GSM4061725 A549_VECTOR
GSM4061726 HCC827_AKT1
BioProject PRJNA564014
SRA SRP220432

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE136904_RAW.tar 1.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap