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Series GSE136346 Query DataSets for GSE136346
Status Public on Nov 11, 2021
Title Identification of Ankrd35 as a mediator of cisplatin response in non-small cell lung cancer by ex vivo 3D screening of primary tumor spheroids
Organism Mus musculus
Experiment type Expression profiling by array
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
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Submission date Aug 26, 2019
Last update date Nov 12, 2021
Contact name David Simpson
E-mail(s) David.Simpson@ucsf.edu
Organization name UCSF
Street address 1550 4th Street
City San Francisco
State/province California
ZIP/Postal code 94158
Country USA
 
Platforms (5)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (412)
GSM3935839 LK2DG1: LKR10_2D_shGFP_Rep1
GSM3935840 LK2DG2: LKR10_2D_shGFP_Rep2
GSM3935841 LK2DG3: LKR10_2D_shGFP_Rep3
This SuperSeries is composed of the following SubSeries:
GSE134063 Regulation of gene expression by Ankrd35 in LKR10 cells grown in 2D monoculture or as 3D clusters in methylcellulose
GSE134199 Cisplatin induced gene expression in ex vivo primary tumor cells grown in 3D cultures
GSE135720 Comparison of gene expression in cisplatin resistant tumors to chemonaive tumors from a lung cancer mouse model
Relations
BioProject PRJNA562272

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE136346_RAW.tar 43.8 Mb (http)(custom) TAR (of TXT)
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