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GEO help: Mouse over screen elements for information. |
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Status |
Public on May 18, 2021 |
Title |
SS18 is a phase-separation protein relocating from pluripotent to somatic loci during mESC differentiation |
Organism |
Mus musculus |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing
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Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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Citation(s) |
34215745, 35710570 |
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Submission date |
Aug 06, 2019 |
Last update date |
Jun 27, 2022 |
Contact name |
kuang junqi |
E-mail(s) |
kuangjunqi@westlake.edu.cn
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Organization name |
westlake University
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Street address |
No.18 Shilongshan Road
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City |
hangzhou |
ZIP/Postal code |
310024 |
Country |
China |
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Platforms (3) |
GPL16417 |
Illumina MiSeq (Mus musculus) |
GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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Samples (43)
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GSM4007593 |
ESCs, Dox.12h.ATAC |
GSM4007594 |
EB, Ss18-ChIP-seq |
GSM4007595 |
EpiSCs, Ss18-ChIP-seq |
GSM4007596 |
ESCs, H3K27ac-ChIP-seq.0h |
GSM4007597 |
ESCs, H3K27ac-ChIP-seq.4h |
GSM4007598 |
ESCs, H3K27ac-ChIP-seq.8h |
GSM4007599 |
ESCs, H3K27ac-ChIP-seq.12h |
GSM4007600 |
ESCs, Jun-ChIP-seq.8h |
GSM4007601 |
ESCs, Ss18-ChIP-seq.0h |
GSM4007602 |
ESCs, Ss18-ChIP-seq.8h |
GSM4007603 |
ESCs, Jun-0h.RNA-seq |
GSM4007604 |
ESCs, Jun-1h.RNA-seq |
GSM4007605 |
ESCs, Jun-2h.RNA-seq |
GSM4007606 |
ESCs, Jun-4h.RNA-seq |
GSM4007607 |
ESCs, Jun-8h.RNA-seq |
GSM4007608 |
ESCs, Jun-12h.RNA-seq |
GSM4007609 |
ESCs, Jun-24h.RNA-seq |
GSM4007610 |
ESCs, Ss18-KO.0h.RNA-seq |
GSM4007611 |
ESCs, Ss18-KO.8h.RNA-seq |
GSM4007612 |
ESCs, Ss18-KO.24h.RNA-seq |
GSM4007613 |
ESCs, WT.0h.RNA-seq |
GSM4007614 |
ESCs, WT.8h.RNA-seq |
GSM4007615 |
ESCs, WT.24h.RNA-seq |
GSM4605440 |
ESCs, Brg1-ChIP-WT-0h |
GSM4605441 |
ESCs, Brg1-ChIP-WT-8h |
GSM4605442 |
ESCs, DMSO-K27ac-8h |
GSM4605443 |
ESCs, DMSO-Jun-8h |
GSM4605444 |
ESCs, DMSO-Ss18-8h |
GSM4605445 |
ESCs, PB-K27ac-8h |
GSM4605446 |
ESCs, PB-Jun-8h |
GSM4605447 |
ESCs, PB-Ss18-8h |
GSM5348404 |
ESCs, SS18-ChIP-0h |
GSM5348405 |
ESCs, SS18-ChIP-4h |
GSM5348406 |
ESCs, SS18-ChIP-8h |
GSM5348407 |
ESCs, BRD7-ChIP-0h |
GSM5348408 |
ESCs, BRD7-ChIP-4h |
GSM5348409 |
ESCs, BRD7-ChIP-8h |
GSM5348410 |
ESCs, PBRM1-ChIP-0h |
GSM5348411 |
ESCs, PBRM1-ChIP-4h |
GSM5348412 |
ESCs, PBRM1-ChIP-8h |
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This SuperSeries is composed of the following SubSeries:
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GSE135395 |
SS18 is a phase-separation protein relocating from pluripotent to somatic loci during mESC differentiation [ATAC-Seq] |
GSE135396 |
SS18 is a phase-separation protein relocating from pluripotent to somatic loci during mESC differentiation [ChIP-Seq Dataset 1] |
GSE135397 |
SS18 is a phase-separation protein relocating from pluripotent to somatic loci during mESC differentiation [RNA-Seq] |
GSE152175 |
SS18 is a phase-separation protein relocating from pluripotent to somatic loci during mESC differentiation [ChIP-Seq Dataset 2] |
GSE175818 |
SS18 is a phase-separation protein relocating from pluripotent to somatic loci during mESC differentiation [ChIP-Seq Dataset 3] |
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Relations |
BioProject |
PRJNA558951 |
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