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Series GSE135337 Query DataSets for GSE135337
Status Public on Nov 11, 2021
Title Transcriptomic Characterization of Local Invasion in Human Bladder Cancer by Single Cell RNA Sequencing
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Investigating intra-tumor heterogeneity of bladder cancer has been largely based on conventional pathological staging and bulk samples sequencing for analyzed multiple spatially separated regions within one tumor. However, it still lack a comprehensive understanding for this question at single cell resolution.
Overall design Single cell mRNA profiles of seven primary tumor samples and one paracancerous tissue sample from seven patients with bladder cancer were generated by 10X Genomics plartform, without technical replication, and sequenced by NovaSeq 6000 (Illumina)
Contributor(s) Wang J, Gao W
Citation(s) 34480339
Submission date Aug 03, 2019
Last update date Feb 11, 2022
Contact name Jia Wang
Phone 15821724825
Organization name SJTU CHINA
Street address Huashan Rd. 1940, build 3. Shanghai,
City Shanghai
State/province Shanghai China
ZIP/Postal code 200017
Country China
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (8)
GSM4006644 BC1-scRNA
GSM4006645 BC2-scRNA
GSM4006646 BC3-scRNA
BioProject PRJNA558456
SRA SRP217277

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135337_RAW.tar 96.0 Mb (http)(custom) TAR (of TXT, XLS)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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