|
| Status |
Public on Nov 11, 2020 |
| Title |
Single Cell Transcriptional Profile of Col1a1GFP+ cells in health and EAE |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Col1a1GFP+ cells from the spinal cords of healthy mice or mice in the early stages of EAE symptoms were transcriptionally profiled at the single cell level to determine subtypes of Col1+ CNS cells in health and disease
|
| |
|
| Overall design |
Spinal cords from Col1a1GFP mice with or without EAE were dissociated into a single cell suspension, GFP+ cells enriched using FACS sorting and sequenced using the 10x genomics v2 pipeline
|
| |
|
| Contributor(s) |
Dorrier C, Daneman R |
| Citation(s) |
33526922 |
| |
| Submission date |
Jul 31, 2019 |
| Last update date |
Feb 10, 2021 |
| Contact name |
Cayce Dorrier |
| E-mail(s) |
cdorrier@ucsd.edu
|
| Organization name |
UCSD
|
| Street address |
9500 Gilman Drive
|
| City |
La Jolla |
| ZIP/Postal code |
92093 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
|
| Samples (5)
|
|
| Relations |
| BioProject |
PRJNA557683 |
| SRA |
SRP216933 |
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