NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE134255 Query DataSets for GSE134255
Status Public on Jul 01, 2021
Title Murine colonic tumor single-cell RNA-seq
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary WT normal, Adjacent normal, and tumor from the colon of mice (C57BL/6) generated from different conditions
 
Overall design AOM/DSS tumor vs. Lrig1creERT2/+ tumor;Apc-fl/+ vs. adjacent normal vs. WT normal
 
Contributor(s) Lau K, Simmons A, Li W
Citation(s) 35600339
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 CA238553 The role of distinct cancer stem cell populations in colorectal cancer Vanderbilt University Medical Center Ken Siu Kwong Lau
R01 DK103831 Spatio-temporal dissection of epithelial cell hierarchies in gut inflammation Vanderbilt University Medical Center Ken Siu Kwong Lau
Submission date Jul 15, 2019
Last update date Sep 27, 2022
Contact name Ken Lau
E-mail(s) ken.s.lau@vanderbilt.edu
Phone 6159366859
Organization name Vanderbilt University
Department Cell and Developmental Biology
Street address 2215 Garland Ave. MRBIV10475
City Nashville
State/province TN
ZIP/Postal code 37232
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (9)
GSM3940486 AOM/DSS_1
GSM3940487 AOM/DSS_2
GSM3940488 AOM/DSS_3
Relations
BioProject PRJNA554576
SRA SRP214583

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE134255_RAW.tar 25.8 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap