|
| Status |
Public on Apr 22, 2020 |
| Title |
RNAseq of circulating CD34+ cells derived from TCIRG1-defective patients |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Transcriptomic profile of CD34+ cells circulating in peripheral blood of TCIRG1-mutated osteopetrotic patients, compared to cord blood and mobilized CD34+ cells
|
| |
|
| Overall design |
Circulating CD34+ cells were isolated from peripheral blood of 6 TCIRG1 osteopetrotic patients, using microbeads. Commercially available cord blood (n=3) and mobilized peripheral blood CD34+ cells (n=3) were used as controls.
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| |
|
| Contributor(s) |
Capo V, Penna S, Villa A, Merelli I, Barcella M, Uva P, Cusano R |
| Citation(s) |
31949009 |
| Submission date |
Jun 18, 2019 |
| Last update date |
Apr 22, 2020 |
| Contact name |
Ivan Merelli |
| E-mail(s) |
ivan.merelli@itb.cnr.it
|
| Phone |
+390226422600
|
| Organization name |
Consiglio Nazionale delle Ricerche
|
| Department |
Istituto di Tecnologie Biomediche
|
| Lab |
Bioinformatics
|
| Street address |
via F.lli Cervi 93
|
| City |
Segrate |
| State/province |
Milano |
| ZIP/Postal code |
20090 |
| Country |
Italy |
| |
|
| Platforms (1) |
| GPL21290 |
Illumina HiSeq 3000 (Homo sapiens) |
|
| Samples (12)
|
| GSM3895626 |
CD34+ cells isolated from peripheral blood of TCIRG1-mutated patient [ARO17] |
| GSM3895627 |
CD34+ cells isolated from peripheral blood of TCIRG1-mutated patient [ARO18] |
| GSM3895628 |
CD34+ cells isolated from peripheral blood of TCIRG1-mutated patient [ARO19] |
| GSM3895629 |
CD34+ cells isolated from peripheral blood of TCIRG1-mutated patient [ARO20] |
| GSM3895630 |
CD34+ cells isolated from peripheral blood of TCIRG1-mutated patient [ARO21] |
| GSM3895631 |
CD34+ cells isolated from peripheral blood of TCIRG1-mutated patient [ARO25] |
| GSM3895632 |
Cord blood CD34+ cells [CB2_day_0] |
| GSM3895633 |
Cord blood CD34+ cells [CB3_day_0] |
| GSM3895634 |
Cord blood CD34+ cells [CB7_day_0] |
| GSM3895635 |
mobilized peripheral blood CD34+ cells [mPB_HD_1_DS] |
| GSM3895636 |
mobilized peripheral blood CD34+ cells [mPB_HD_2_R] |
| GSM3895637 |
mobilized peripheral blood CD34+ cells [mPB_HD_3] |
|
| Relations |
| BioProject |
PRJNA549401 |
| SRA |
SRP201722 |
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