GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE132693 Query DataSets for GSE132693
Status Public on Jun 14, 2019
Title RNAseq of prostate cancer cells (PC3 and DU145) treated with 2.5 uM pentamidine or vehicle
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To uncover the mechanism underlying the effect of pentamidine on prostate cancer cells, we performed RNA sequencing (RNA-seq) to compare the transcriptional difference between pentamidine- and vehicle-treated prostate cancer cells (PC3 and DU145 cells).
Overall design mRNA profiles of PC3 and DU145 cells treated with 2.5 uM pentamidine or vehicle were generated by deep sequencing, in triplicate, using Illumina Novaseq 6000 PE150.
Contributor(s) Liu L
Citation(s) 31721355
Submission date Jun 13, 2019
Last update date Dec 25, 2019
Contact name Lin Liu
Organization name Shanghai Jiao Tong University
Department Renji‐Med X Clinical Stem Cell Research Center, Ren Ji Hospital
Lab State Key Laboratory of Oncogenes and Related Genes
Street address Shanghai
City Shanghai
State/province Shanghai
ZIP/Postal code 222110
Country China
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (12)
GSM3887765 PC3_CON1 (P0-1)
GSM3887766 PC3_CON2 (P0-2)
GSM3887767 PC3_CON3 (P0-3)
BioProject PRJNA548765
SRA SRP201339

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE132693_All.FPKM.exp_liulin930714.txt.gz 1.2 Mb (ftp)(http) TXT
GSE132693_All.ReadsCount_liulin930714.txt.gz 4.7 Mb (ftp)(http) TXT
GSE132693_DU145_PTMVSDU145_CON.All_liulin930714.txt.gz 670.2 Kb (ftp)(http) TXT
GSE132693_PC3_PTMVSPC3_CON.All_liulin930714.txt.gz 662.4 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap