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Series GSE132627 Query DataSets for GSE132627
Status Public on May 28, 2021
Title RNA-seq analysis of CD276-high/EpCAM+ cells from HNSCC patient-derived-xenograft
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We performed RNA sequencing (RNA-seq) to compare the gene expression pattern between CD276-high/EpCAM+ and CD276-low/EpCAM+ cells isolated from human HNSCC PDX. We identified a cohort of key oncogenes associate with cancer stemness enriched in CD276-high cells. Suggesting CD276 may play a positive role in maintaining cancer stem cells in human head and neck squamous cell carcinoma.
Overall design Examination of RNA-seq of CD276-high/EpCAM+ and CD276-low/EpCAM+ cells
Contributor(s) Li J
Citation(s) 33945793
Submission date Jun 12, 2019
Last update date May 28, 2021
Contact name Jiong Li
Phone 3105617186
Organization name VCU
Street address 800 E Leigh Street, suite 212
City Richmond
State/province Virginia
ZIP/Postal code 23298
Country USA
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (2)
GSM3882451 PDX1-CD276-high/EpCAM+
GSM3882452 PDX1-CD276-low/EpCAM+
BioProject PRJNA548543
SRA SRP201215

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Supplementary file Size Download File type/resource
GSE132627_HNSCC_PDX1_CD276.csv.gz 650.9 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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