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Series GSE132266 Query DataSets for GSE132266
Status Public on May 10, 2024
Title scChIC-seq reveals focusing of global chromatin domains during differentiation
Organisms Homo sapiens; Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We profile single cell histone modifications using a new high-throughput scChIC-seq technique on K562 and mouse bone marrow.
 
Overall design single cell histone modifications on K562 and mouse bone marrow.
 
Contributor(s) Zeller P, Yeung J, de Barbanson B, van Oudenaarden A
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 05, 2019
Last update date May 10, 2024
Contact name Jake Yeung
E-mail(s) jakeyeung@gmail.com
Organization name Hubrecht Institute
Street address Uppsalalaan 8
City Utrecht
ZIP/Postal code 3584T
Country Netherlands
 
Platforms (2)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (80)
GSM3855270 B6_BM-H3K4me3-m1-2_H5VTLBGXB_S6
GSM3855271 B6_BM-H3K4me3-m1-1_AH5WT3BGXB_S5
GSM3855272 BM-H3K27me3-m1-2_AH3VGVBGX9_S2
Relations
BioProject PRJNA547348
SRA SRP200568

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE132266_B6-13W1-BM-H3K27me3-1-merged.filtered.bincounts.slidewin.csv.gz 10.1 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K27me3-2-merged.filtered.bincounts.slidewin.csv.gz 11.6 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K27me3-3-merged.filtered.bincounts.slidewin.csv.gz 12.9 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K27me3-4-merged.filtered.bincounts.slidewin.csv.gz 18.0 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K4me1-1-merged.filtered.bincounts.slidewin.csv.gz 5.8 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K4me1-2-merged.filtered.bincounts.slidewin.csv.gz 7.7 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K4me1-3-merged.filtered.bincounts.slidewin.csv.gz 8.1 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K4me1-4-merged.filtered.bincounts.slidewin.csv.gz 11.5 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K4me3-1-merged.filtered.bincounts.slidewin.csv.gz 5.0 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K4me3-2-merged.filtered.bincounts.slidewin.csv.gz 6.1 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K4me3-3-merged.filtered.bincounts.slidewin.csv.gz 6.7 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K4me3-4-merged.filtered.bincounts.slidewin.csv.gz 6.1 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K9me3-1-merged.filtered.bincounts.slidewin.csv.gz 10.3 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K9me3-2-merged.filtered.bincounts.slidewin.csv.gz 10.7 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K9me3-3-merged.filtered.bincounts.slidewin.csv.gz 9.9 Mb (ftp)(http) CSV
GSE132266_B6-13W1-BM-H3K9me3-4-merged.filtered.bincounts.slidewin.csv.gz 13.4 Mb (ftp)(http) CSV
GSE132266_BM-H3K27me3-build95.txt.gz 56.2 Mb (ftp)(http) TXT
GSE132266_BM-H3K4me1-build95.txt.gz 29.6 Mb (ftp)(http) TXT
GSE132266_BM-H3K4me3-build95.txt.gz 18.1 Mb (ftp)(http) TXT
GSE132266_BM-H3K9me3-build95.txt.gz 35.8 Mb (ftp)(http) TXT
GSE132266_K562-G1-H3K27me3-100kb.txt.gz 42.5 Mb (ftp)(http) TXT
GSE132266_K562-G1-H3K4me1-100kb.txt.gz 28.2 Mb (ftp)(http) TXT
GSE132266_K562-G1-H3K4me3-100kb.txt.gz 14.2 Mb (ftp)(http) TXT
GSE132266_K562-G1-H3K9me3-100kb.txt.gz 50.0 Mb (ftp)(http) TXT
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Processed data are available on Series record
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