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Series GSE131596 Query DataSets for GSE131596
Status Public on Jun 01, 2020
Title RNA-sequencing of Panc-1 cells with ABCG2 over-expression
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study was to determine whether the selected sgRNAs increases expression of ABCG2 and whether there are other significant off-target effects
Overall design Four samples. Two non-targeting controls and two independent guides targeting ABCG2 over-expression
Contributor(s) Cooper SJ
Citation(s) 34049503
Submission date May 21, 2019
Last update date Jun 09, 2021
Contact name Sara Cooper
Phone 256-327-9491
Organization name HudsonAlpha Institute
Street address 601 Genome Wau
City Huntsville
State/province AL
ZIP/Postal code 35806
Country USA
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (4)
GSM3790555 Panc1_NTC1
GSM3790556 Panc1_NTC2
GSM3790557 Panc1_ABCG2_A
BioProject PRJNA544110
SRA SRP199127

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE131596_GEOSubmission_CountTableABCG2.xlsx 1.9 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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