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Series GSE131586 Query DataSets for GSE131586
Status Public on May 22, 2019
Title ATAC-seq of BCSCsSETD4 and BCSCsGFP
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report the ATAC-SEQ results of BCSCsSETD4 and BCSCsGFP. To explore epigenetic regulation mechnism in BCSC quiescence, Assay for Transposase-Accessible Chromatin with high throughput sequencing (ATAC-seq) were performed in BCSCsSETD4 and BCSCsGFP. Quiescent BCSCsSETD4 showed marked enrichment of H4K20me3 modifications relative to BCSCsGFP.
Overall design Examination of the chromatin structure using ATAC-seq in BCSCsSETD4 and BCSCsGFP.
Contributor(s) Sen Y, Yan-Fu D, Wen-Huan J, Jing-Yi F, Qian Z, Xiao-Li L, Sun-Li C, Xue-Ting H, Yao-Shun Y, Qian-Yun L, Jin-Shu Y, Sheng-Nan J, Guo-Ping D, Yue-Hong W, Jiao-Jiao Z, Yi-Ding C, Wei-Jun Y
Citation(s) 31308046
Submission date May 21, 2019
Last update date Oct 25, 2019
Contact name sen ye
Phone +8657188206365
Organization name Zhejiang University
Street address 866 Yuhangtang Rd, Hangzhou, Zhejiang Province, P.R. China
City Hangzhou
State/province Zhejiang
ZIP/Postal code 310058
Country China
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (2)
GSM3790223 BCSCsSETD4 [ATAC-seq]
GSM3790224 BCSCsGFP [ATAC-seq]
BioProject PRJNA544096
SRA SRP199119

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Supplementary file Size Download File type/resource
GSE131586_SETD4_vs_GFP_peak_compare_table.tsv.gz 439.8 Kb (ftp)(http) TSV
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Processed data are available on Series record

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