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Series GSE130272 Query DataSets for GSE130272
Status Public on Apr 25, 2019
Title IL-12 abrogates calcineurin-dependent immune evasion during leukemia progression
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Exploitation of the immune system has emerged as an important therapeutic strategy for acute lymphoblastic leukemia (ALL). However, the mechanisms of immune evasion during leukemia progression remain poorly understood. We sought to understand the role of calcineurin in ALL and observed that knocking-down calcineurin B (CnB) in leukemia cells dramatically prolonged survival in immune-competent but not immune-deficient recipients. Furthermore, immune-competent recipients were protected from challenge with leukemia if they were first immunized with CnB-deficient leukemia, suggesting robust adaptive immunity. In the bone marrow, recipients of CnB-deficient leukemia had expansion of T cell populations as compared to controls. Gene expression analyses of leukemia cells extracted from bone marrow identified Cn-dependent significant changes in the expression of immuno-regulatory genes. We confirmed increased secretion of IL-12 from CnB-deficient leukemia cells, sufficient to induce T cell activation ex vivo, an effect that was abolished when IL-12 was neutralized. Strikingly, recombinant IL-12 prolonged survival of mice challenged with highly aggressive B-ALL. Moreover, gene expression analyses from children with ALL demonstrate prolonged survival in those with higher expression of either IL-12A or IL-12B. These data suggest that leukemia cells are dependent upon calcineurin for immune evasion by restricting the regulation of pro-inflammatory genes, particularly IL-12.
 
Overall design 8 samples total; 4 each of murine BCR-ABL1+/Arf null leukemia with a nonsilencing shRNA or shRNA directed against calcineurin B
 
Contributor(s) Rabe J, Porter C
Citation(s) 31142509
Submission date Apr 24, 2019
Last update date Jul 25, 2019
Contact name Christopher Porter
E-mail(s) chris.porter@emory.edu
Organization name Emory University
Department Pediatrics
Street address 1760 Haygood Drive
City Atlanta
State/province GA
ZIP/Postal code 30322
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (8)
GSM3734990 shNS_239
GSM3734991 shNS_241
GSM3734992 shNS_243
Relations
BioProject PRJNA534497
SRA SRP193770

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE130272_RNA-Seq_shNS_v_shCn_-_all_-_counts_only.txt.gz 631.5 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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