|
| Status |
Public on Oct 02, 2008 |
| Title |
Genome-wide mapping of RNA Polymerase II binding sites |
| Project |
ENCODE
|
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Protein coding genes and some of the non-coding RNA genes in eucaryotes are transcribed by RNA Polymerase II. A transcription machinery complex consists of RNA Pol II and many other proteins including transcription factors, activators and repressors of transcription. Pol II binding sites are found in actively transcribing genes and many which are not actively transcribing.
For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf
|
| |
|
| Overall design |
Map binding sites of RNA Polymerase II in the genome of K562 & NB4 cells
|
| Web link |
http://www.ncbi.nlm.nih.gov/projects/geo/info/ENCODE.html
|
| |
|
| Contributor(s) |
Raha D, Snyder M |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| BioProject |
PRJNA63447 |
| |
| Submission date |
Oct 01, 2008 |
| Last update date |
May 15, 2019 |
| Contact name |
Flora Vaccarino |
| Organization name |
Yale University
|
| Department |
Child Study Center
|
| Lab |
Vaccarino
|
| Street address |
230 South Frontage Road
|
| City |
New Haven |
| State/province |
CT |
| ZIP/Postal code |
06520 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9115 |
Illumina Genome Analyzer II (Homo sapiens) |
|
| Samples (4)
|
|
| Relations |
| SRA |
SRP000416 |
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