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Series GSE130005 Query DataSets for GSE130005
Status Public on Jul 27, 2020
Title Effect of miRNA-30e-5p on innate immunity during viral infection.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Comparative transcriptomic analysis of A549 cell after overexpression of miRNA-30e-5p revealed that miRNA-30e-5p elevate innate immune responses by targeting the negative regulators of innate immune signalling.
Overall design We transfected A549 cells with either miR-NC1 or miR-30e mimic or mock, cells were then mock infected or infected with Newcastle Disease Virus (NDV) infection, total RNA was isolated and whole transcriptomic sequencing was done.
Contributor(s) Mishra R, Kumar H
Citation(s) 32688283
Submission date Apr 18, 2019
Last update date Jul 27, 2020
Contact name Himanshu Kumar
Organization name IISER Bhopal
Department Biological Sciences
Lab 215
Street address Indore bypass road
City Bhopal
State/province MADHYA PRADESH
ZIP/Postal code 462066
Country India
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (6)
GSM3729207 Mock-replicate1
GSM3729208 Mock-replicate2
GSM3729209 miR-NC1-replicate1
BioProject PRJNA533544
SRA SRP192955

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE130005_RAW.tar 1.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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