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Series GSE129950 Query DataSets for GSE129950
Status Public on Oct 01, 2019
Title A novel lncRNA lncRNA-AK096729 promotes colorectal carcinogenesis and glucose metabolism by stabilizing and specifying the transcription modification pattern of c-Myc
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To elucidate whether lncRNA-AK096729 plays a role in colorectal cancer tumorigenesis, a RNA-seq analysis was performed to compare the gene expression profiles of lncRNA-AF339830 siRNA and control siRNA transfectants.
Overall design RNA-seq was performed in SW480 colorectal cancer cells after lncRNA-AK096729 knock down
Contributor(s) Yujie B
Citation(s) 31515468
Submission date Apr 17, 2019
Last update date Apr 13, 2020
Contact name Haoyan Chen
Organization name Renji Hospital
Street address 145 Shandong Road
City Shanghai
State/province Shanghai
ZIP/Postal code 200001
Country China
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (6)
GSM3728495 Control siRNA_N1
GSM3728496 Control siRNA_N2
GSM3728497 Control siRNA_N3
BioProject PRJNA533256
SRA SRP192850

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE129950_RAW.tar 1.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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