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GEO accession:
Series GSE126805
Query DataSets for GSE126805
Status
Public on Feb 21, 2019
Title
Transcriptional trajectories of human kidney injury progression
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Summary
RNAseq analysis on protocol biopsies obtained from 42 kidney transplant recipients at 4 time points after kidney transplantation.
Overall design
Protocol biopsies obtained before reperfusion, after reperfusion, 3 months and 12 months after kidney transplantation.
Contributor(s)
CippĂ PE
,
McMahon AP
Citation(s)
30429361
,
38487013
Submission date
Feb 20, 2019
Last update date
Mar 20, 2024
Contact name
Pietro Ernesto Cippa
E-mail(s)
pietro.cippa@eoc.ch
Organization name
Ente Ospedaliero Cantonale
Department
Nephrology
Street address
Via Tesserete 46
City
Lugano
ZIP/Postal code
CH-6903
Country
Switzerland
Platforms (1)
GPL21290
Illumina HiSeq 3000 (Homo sapiens)
Samples (163)
Less...
More...
GSM3613602
sample.kidney_03_1year
GSM3613603
sample.kidney_03_3months
GSM3613604
sample.kidney_03_baseline_post
GSM3613605
sample.kidney_03_baseline_pre
GSM3613606
sample.kidney_02_1year
GSM3613607
sample.kidney_02_3months
GSM3613608
sample.kidney_02_baseline_post
GSM3613609
sample.kidney_02_baseline_pre
GSM3613610
sample.kidney_01_1year
GSM3613611
sample.kidney_01_3months
GSM3613612
sample.kidney_01_baseline_post
GSM3613613
sample.kidney_01_baseline_pre
GSM3613614
sample.kidney_15_1year
GSM3613615
sample.kidney_15_3months
GSM3613616
sample.kidney_15_baseline_post
GSM3613617
sample.kidney_15_baseline_pre
GSM3613618
sample.kidney_14_1year
GSM3613619
sample.kidney_14_3months
GSM3613620
sample.kidney_14_baseline_post
GSM3613621
sample.kidney_14_baseline_pre
GSM3613622
sample.kidney_13_1year
GSM3613623
sample.kidney_13_3months
GSM3613624
sample.kidney_13_baseline_post
GSM3613625
sample.kidney_13_baseline_pre
GSM3613626
sample.kidney_12_1year
GSM3613627
sample.kidney_12_3months
GSM3613628
sample.kidney_12_baseline_post
GSM3613629
sample.kidney_12_baseline_pre
GSM3613630
sample.kidney_11_1year
GSM3613631
sample.kidney_11_3months
GSM3613632
sample.kidney_11_baseline_post
GSM3613633
sample.kidney_11_baseline_pre
GSM3613634
sample.kidney_10_1year
GSM3613635
sample.kidney_10_3months
GSM3613636
sample.kidney_10_baseline_post
GSM3613637
sample.kidney_10_baseline_pre
GSM3613638
sample.kidney_09_1year
GSM3613639
sample.kidney_09_3months
GSM3613640
sample.kidney_09_baseline_post
GSM3613641
sample.kidney_09_baseline_pre
GSM3613642
sample.kidney_08_1year
GSM3613643
sample.kidney_08_3months
GSM3613644
sample.kidney_08_baseline_post
GSM3613645
sample.kidney_08_baseline_pre
GSM3613646
sample.kidney_07_1year
GSM3613647
sample.kidney_07_3months
GSM3613648
sample.kidney_07_baseline_post
GSM3613649
sample.kidney_07_baseline_pre
GSM3613650
sample.kidney_06_1year
GSM3613651
sample.kidney_06_3months
GSM3613652
sample.kidney_06_baseline_post
GSM3613653
sample.kidney_06_baseline_pre
GSM3613654
sample.kidney_05_1year
GSM3613655
sample.kidney_05_3months
GSM3613656
sample.kidney_05_baseline_post
GSM3613657
sample.kidney_05_baseline_pre
GSM3613658
sample.kidney_04_1year
GSM3613659
sample.kidney_04_3months
GSM3613660
sample.kidney_04_baseline_post
GSM3613661
sample.kidney_04_baseline_pre
GSM3613662
sample.kidney_28_baseline_post
GSM3613663
sample.kidney_28_baseline_pre
GSM3613664
sample.kidney_27_1year
GSM3613665
sample.kidney_27_3months
GSM3613666
sample.kidney_27_baseline_post
GSM3613667
sample.kidney_27_baseline_pre
GSM3613668
sample.kidney_26_1year
GSM3613669
sample.kidney_26_3months
GSM3613670
sample.kidney_26_baseline_post
GSM3613671
sample.kidney_26_baseline_pre
GSM3613672
sample.kidney_25_1year
GSM3613673
sample.kidney_25_3months
GSM3613674
sample.kidney_25_baseline_post
GSM3613675
sample.kidney_25_baseline_pre
GSM3613676
sample.kidney_24_1year
GSM3613677
sample.kidney_24_3months
GSM3613678
sample.kidney_24_baseline_post
GSM3613679
sample.kidney_24_baseline_pre
GSM3613680
sample.kidney_23_1year
GSM3613681
sample.kidney_23_3months
GSM3613682
sample.kidney_23_baseline_post
GSM3613683
sample.kidney_23_baseline_pre
GSM3613684
sample.kidney_22_1year
GSM3613685
sample.kidney_22_3months
GSM3613686
sample.kidney_22_baseline_post
GSM3613687
sample.kidney_22_baseline_pre
GSM3613688
sample.kidney_21_1year
GSM3613689
sample.kidney_21_3months
GSM3613690
sample.kidney_21_baseline_post
GSM3613691
sample.kidney_21_baseline_pre
GSM3613692
sample.kidney_20_3months
GSM3613693
sample.kidney_20_baseline_post
GSM3613694
sample.kidney_20_baseline_pre
GSM3613695
sample.kidney_19_1year
GSM3613696
sample.kidney_19_baseline_post
GSM3613697
sample.kidney_19_baseline_pre
GSM3613698
sample.kidney_18_1year
GSM3613699
sample.kidney_18_3months
GSM3613700
sample.kidney_18_baseline_post
GSM3613701
sample.kidney_18_baseline_pre
GSM3613702
sample.kidney_17_1year
GSM3613703
sample.kidney_17_3months
GSM3613704
sample.kidney_17_baseline_post
GSM3613705
sample.kidney_17_baseline_pre
GSM3613706
sample.kidney_16_1year
GSM3613707
sample.kidney_16_3months
GSM3613708
sample.kidney_16_baseline_post
GSM3613709
sample.kidney_16_baseline_pre
GSM3613710
sample.kidney_42_3months
GSM3613711
sample.kidney_42_baseline_post
GSM3613712
sample.kidney_42_baseline_pre
GSM3613713
sample.kidney_41_3months
GSM3613714
sample.kidney_41_baseline_post
GSM3613715
sample.kidney_41_baseline_pre
GSM3613716
sample.kidney_40_1year
GSM3613717
sample.kidney_40_3months
GSM3613718
sample.kidney_40_baseline_post
GSM3613719
sample.kidney_40_baseline_pre
GSM3613720
sample.kidney_39_1year
GSM3613721
sample.kidney_39_3months
GSM3613722
sample.kidney_39_baseline_post
GSM3613723
sample.kidney_39_baseline_pre
GSM3613724
sample.kidney_38_1year
GSM3613725
sample.kidney_38_3months
GSM3613726
sample.kidney_38_baseline_post
GSM3613727
sample.kidney_38_baseline_pre
GSM3613728
sample.kidney_37_1year
GSM3613729
sample.kidney_37_3months
GSM3613730
sample.kidney_37_baseline_post
GSM3613731
sample.kidney_37_baseline_pre
GSM3613732
sample.kidney_36_1year
GSM3613733
sample.kidney_36_3months
GSM3613734
sample.kidney_36_baseline_post
GSM3613735
sample.kidney_36_baseline_pre
GSM3613736
sample.kidney_35_1year
GSM3613737
sample.kidney_35_3months
GSM3613738
sample.kidney_35_baseline_post
GSM3613739
sample.kidney_35_baseline_pre
GSM3613740
sample.kidney_34_1year
GSM3613741
sample.kidney_34_3months
GSM3613742
sample.kidney_34_baseline_post
GSM3613743
sample.kidney_34_baseline_pre
GSM3613744
sample.kidney_33_1year
GSM3613745
sample.kidney_33_3months
GSM3613746
sample.kidney_33_baseline_post
GSM3613747
sample.kidney_33_baseline_pre
GSM3613748
sample.kidney_32_1year
GSM3613749
sample.kidney_32_3months
GSM3613750
sample.kidney_32_baseline_post
GSM3613751
sample.kidney_32_baseline_pre
GSM3613752
sample.kidney_31_1year
GSM3613753
sample.kidney_31_3months
GSM3613754
sample.kidney_31_baseline_post
GSM3613755
sample.kidney_31_baseline_pre
GSM3613756
sample.kidney_30_1year
GSM3613757
sample.kidney_30_3months
GSM3613758
sample.kidney_30_baseline_post
GSM3613759
sample.kidney_30_baseline_pre
GSM3613760
sample.kidney_29_1year
GSM3613761
sample.kidney_29_3months
GSM3613762
sample.kidney_29_baseline_post
GSM3613763
sample.kidney_28_1year
GSM3613764
sample.kidney_28_3months
Relations
BioProject
PRJNA523370
SRA
SRP186383
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE126805_all.gene_RPKM.txt.gz
24.5 Mb
(ftp)
(http)
TXT
GSE126805_all.gene_counts.txt.gz
7.2 Mb
(ftp)
(http)
TXT
SRA Run Selector
Raw data are available in SRA
Processed data are available on Series record
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