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Series GSE126427 Query DataSets for GSE126427
Status Public on Feb 10, 2020
Title Double-stranded Alu RNAs, type 1 IFN responses, and relapsing remitting multiple sclerosis
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We report here an double stranded RNA sequencing from multiple sclerosis patient blood samples
Overall design Whole blood samples (~2.5 ml) were collected in PAXGENE tubes to immediately stabilize endogenous RNA from the following patient groups: 1) patients at the indicated times after their first clinical event suggestive of presence of RRMS commonly referred to as a clinically isolated event or CIS (MS-C) who later went on to receive a diagnosis of RRMS, files labeled as sample 1, sample 2, sample 3 or MS-C 1, MS-C 2, MS-C 3, and healthy controls, sample 4, sample 5, sample 6 or HC 1, HC 2, HC 3.
Contributor(s) Aune TM, Karijolich J
Citation(s) 30826177
Submission date Feb 12, 2019
Last update date Jul 05, 2022
Contact name Jeff Rathmell
Organization name Vanderbilt University Medical Center
Department PMI
Lab Jeff Rathmell Lab
Street address 1211 Medical Center Drive
City Nashville
State/province TN
ZIP/Postal code 37232
Country USA
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (6)
GSM3601227 MS-C1
GSM3601228 MS-C2
GSM3601229 MS-C3
BioProject PRJNA521868
SRA SRP185630

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE126427_RAW.tar 9.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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