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GEO accession:
Series GSE126006
Query DataSets for GSE126006
Status
Public on Jul 17, 2020
Title
IL6/STAT3 co-opts ER/FOXA1 regulatory elements to drive metastasis in breast cancer
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
32679107
Submission date
Feb 01, 2019
Last update date
Jul 29, 2020
Contact name
Jason Carroll
E-mail(s)
Jason.Carroll@cruk.cam.ac.uk
Phone
+44 1223 769649
Organization name
Cancer Research UK, Cambridge Institute
Street address
Li Ka Shing Centre, Robinson Way
City
Cambridge
ZIP/Postal code
CB2 ORE
Country
United Kingdom
Platforms (2)
GPL20301
Illumina HiSeq 4000 (Homo sapiens)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
Samples (223)
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More...
GSM3587637
jc3254_NT_1
GSM3587638
jc3255_IL6_1
GSM3587639
jc3257_NT_2
GSM3587640
jc3258_IL6_2
GSM3587641
jc3260_NT_3
GSM3587642
jc3261_IL6_3
GSM3587643
jc3263_NT_4
GSM3587644
jc3264_IL6_4
GSM3587645
jc4207_veh_1
GSM3587646
jc4208_IL6_1
GSM3587647
jc4211_veh_2
GSM3587648
jc4212_IL6_2
GSM3587649
jc4215_veh_3
GSM3587650
jc4216_IL6_3
GSM3587651
jc4219_veh_4
GSM3587652
jc4220_IL6_4
GSM3587653
jc4223_veh_5
GSM3587654
jc4224_IL6_5
GSM3587655
jc4227_veh_6
GSM3587656
jc4228_IL6_6
GSM3587657
JC4356_WT_EtOH_PBS_1
GSM3587658
JC4357_WT_EtOH_IL6_1
GSM3587659
JC4358_WT_ICI_PBS_1
GSM3587660
JC4359_WT_ICI_IL6_1
GSM3587661
JC4360_KO1_EtOH_PBS_1
GSM3587662
JC4361_KO1_EtOH_IL6_1
GSM3587663
JC4362_KO2_EtOH_PBS_1
GSM3587664
JC4363_KO2_EtOH_IL6_1
GSM3587665
JC4364_WT_EtOH_PBS_2
GSM3587666
JC4365_WT_EtOH_IL6_2
GSM3587667
JC4366_WT_ICI_PBS_2
GSM3587668
JC4367_WT_ICI_IL6_2
GSM3587669
JC4368_KO1_EtOH_PBS_2
GSM3587670
JC4369_KO1_EtOH_IL6_2
GSM3587671
JC4370_KO2_EtOH_PBS_2
GSM3587672
JC4371_KO2_EtOH_IL6_2
GSM3587673
JC4372_WT_EtOH_PBS_3
GSM3587674
JC4373_WT_EtOH_IL6_3
GSM3587675
JC4374_WT_ICI_PBS_3
GSM3587676
JC4375_WT_ICI_IL6_3
GSM3587677
JC4376_KO1_EtOH_PBS_3
GSM3587678
JC4377_KO1_EtOH_IL6_3
GSM3587679
JC4378_KO2_EtOH_PBS_3
GSM3587680
JC4379_KO2_EtOH_IL6_3
GSM3587681
JC4380_WT_EtOH_PBS_4
GSM3587682
JC4381_WT_EtOH_IL6_4
GSM3587683
JC4382_WT_ICI_PBS_4
GSM3587684
JC4383_WT_ICI_IL6_4
GSM3587685
JC4384_KO1_EtOH_PBS_4
GSM3587686
JC4385_KO1_EtOH_IL6_4
GSM3587687
JC4386_KO2_EtOH_PBS_4
GSM3587688
JC4387_KO2_EtOH_IL6_4
GSM3587689
JC5154_siCtl_PBS_1
GSM3587690
JC5155_siCtl_IL6_1
GSM3587691
JC5156_siSTAT3_PBS_1
GSM3587692
JC5157_siSTAT3_IL6_1
GSM3587693
JC5158_siER_PBS_1
GSM3587694
JC5159_siER_IL6_1
GSM3587695
JC5160_siFOXA1_PBS_1
GSM3587696
JC5161_siFOXA1_IL6_1
GSM3587697
JC5162_siCtl_PBS_2
GSM3587698
JC5163_siCtl_IL6_2
GSM3587699
JC5164_siSTAT3_PBS_2
GSM3587700
JC5165_siSTAT3_IL6_2
GSM3587701
JC5166_siER_PBS_2
GSM3587702
JC5167_siER_IL6_2
GSM3587703
JC5168_siFOXA1_PBS_2
GSM3587704
JC5169_siFOXA1_IL6_2
GSM3587705
JC5170_siCtl_PBS_3
GSM3587706
JC5171_siCtl_IL6_3
GSM3587707
JC5172_siSTAT3_PBS_3
GSM3587708
JC5173_siSTAT3_IL6_3
GSM3587709
JC5174_siER_PBS_3
GSM3587710
JC5175_siER_IL6_3
GSM3587711
JC5176_siFOXA1_PBS_3
GSM3587712
JC5177_siFOXA1_IL6_3
GSM3587713
JC5178_siCtl_PBS_4
GSM3587714
JC5179_siCtl_IL6_4
GSM3587715
JC5180_siSTAT3_PBS_4
GSM3587716
JC5181_siSTAT3_IL6_4
GSM3587717
JC5182_siER_PBS_4
GSM3587718
JC5183_siER_IL6_4
GSM3587719
JC5184_siFOXA1_PBS_4
GSM3587720
JC5185_siFOXA1_IL6_4
GSM3587721
JC4726_ER veh T47D
GSM3587722
JC4727_ER IL6 T47D
GSM3587723
JC4728_ER veh T47D
GSM3587724
JC4729_ER IL6 T47D
GSM3587725
JC4730_ER veh T47D
GSM3587726
JC4731_ER IL6 T47D
GSM3587727
JC4732_ER veh T47D
GSM3587728
JC4733_ER IL6 T47D
GSM3587729
JC4734_STAT3 veh T47D
GSM3587730
JC4735_STAT3 IL6 T47D
GSM3587731
JC4736_STAT3 veh T47D
GSM3587732
JC4737_STAT3 IL6 T47D
GSM3587733
JC4738_STAT3 veh T47D
GSM3587734
JC4739_STAT3 IL6 T47D
GSM3587735
JC4740_STAT3 veh T47D
GSM3587736
JC4741_STAT3 IL6 T47D
GSM3587737
JC4742_FOXA1 veh T47D
GSM3587738
JC4743_FOXA1 IL6 T47D
GSM3587739
JC4744_FOXA1 veh T47D
GSM3587740
JC4745_FOXA1 IL6 T47D
GSM3587741
JC4746_FOXA1 veh T47D
GSM3587742
JC4747_FOXA1 IL6 T47D
GSM3587743
JC4748_FOXA1 veh T47D
GSM3587744
JC4749_FOXA1 IL6 T47D
GSM3587745
JC4750_pSTAT3 veh T47D
GSM3587746
JC4751_pSTAT3 IL6 T47D
GSM3587747
JC4752_pSTAT3 veh T47D
GSM3587748
JC4753_pSTAT3 IL6 T47D
GSM3587749
JC4754_pSTAT3 veh T47D
GSM3587750
JC4755_pSTAT3 IL6 T47D
GSM3587751
JC4756_pSTAT3 veh T47D
GSM3587752
JC4757_pSTAT3 IL6 T47D
GSM3587753
JC4782_Input Veh T47D
GSM3587754
JC4783_Input Veh T47D
GSM3587755
JC4784_Input IL6 T47D
GSM3587756
JC4785_Input IL6 T47D
GSM3587757
JC4690_FOXA1 Veh MCF7
GSM3587758
JC4691_FOXA1 IL6 MCF7
GSM3587759
JC4692_FOXA1 Veh MCF7
GSM3587760
JC4693_FOXA1 IL6 MCF7
GSM3587761
JC4694_FOXA1 Veh MCF7
GSM3587762
JC4695_FOXA1 IL6 MCF7
GSM3587763
JC4696_FOXA1 Veh MCF7
GSM3587764
JC4697_FOXA1 IL6 MCF7
GSM3587765
JC4722_Input Veh MCF7
GSM3587766
JC4723_Input Veh MCF7
GSM3587767
JC4724_Input IL6 MCF7
GSM3587768
JC4725_Input IL6 MCF7
GSM3587769
jc5833_pSTAT3 Veh MCF7
GSM3587770
jc5834_pSTAT3 IL6 MCF7
GSM3587771
jc5835_pSTAT3 Veh MCF7
GSM3587772
jc5836_pSTAT3 IL6 MCF7
GSM3587773
jc5837_pSTAT3 Veh MCF7
GSM3587774
jc5838_pSTAT3 IL6 MCF7
GSM3587775
jc5839_pSTAT3 Veh MCF7
GSM3587776
jc5840_pSTAT3 IL6 MCF7
GSM3587777
jc5841_STAT3 Veh MCF7
GSM3587778
jc5842_STAT3 IL6 MCF7
GSM3587779
jc5843_STAT3 Veh MCF7
GSM3587780
jc5844_STAT3 IL6 MCF7
GSM3587781
jc5845_STAT3 Veh MCF7
GSM3587782
jc5846_STAT3 IL6 MCF7
GSM3587783
jc5847_STAT3 Veh MCF7
GSM3587784
jc5848_STAT3 IL6 MCF7
GSM3587785
jc5849_ER Veh MCF7
GSM3587786
jc5850_ER IL6 MCF7
GSM3587787
jc5851_ER Veh MCF7
GSM3587788
jc5852_ER IL6 MCF7
GSM3587789
jc5853_ER Veh MCF7
GSM3587790
jc5854_ER IL6 MCF7
GSM3587791
jc5855_ER Veh MCF7
GSM3587792
jc5856_ER IL6 MCF7
GSM3587793
jc5857_Input Veh MCF7
GSM3587794
jc5858_Input IL6 MCF7
GSM3587795
jc5859_Input Veh MCF7
GSM3587796
jc5860_Input IL6 MCF7
GSM3587797
jc5861_Input Veh MCF7
GSM3587798
jc5862_Input IL6 MCF7
GSM3587799
jc5863_Input Veh MCF7
GSM3587800
jc5864_Input IL6 MCF7
GSM3587801
JC5053_pSTAT3_siCtl_PBS
GSM3587802
JC5054_pSTAT3_siCtl_IL6
GSM3587803
JC5055_pSTAT3_siFOXA1_PBS
GSM3587804
JC5056_pSTAT3_siFOXA1_IL6
GSM3587805
JC5057_pSTAT3_siCtl_PBS
GSM3587806
JC5058_pSTAT3_siCtl_IL6
GSM3587807
JC5059_pSTAT3_siFOXA1_PBS
GSM3587808
JC5060_pSTAT3_siFOXA1_IL6
GSM3587809
JC5061_pSTAT3_siCtl_PBS
GSM3587810
JC5062_pSTAT3_siCtl_IL6
GSM3587811
JC5063_pSTAT3_siFOXA1_PBS
GSM3587812
JC5064_pSTAT3_siFOXA1_IL6
GSM3587813
JC5065_pSTAT3_siCtl_PBS
GSM3587814
JC5066_pSTAT3_siCtl_IL6
GSM3587815
JC5067_pSTAT3_siFOXA1_PBS
GSM3587816
JC5068_pSTAT3_siFOXA1_IL6
GSM3587817
JC5069_H3K27ac_siCtl_PBS
GSM3587818
JC5070_H3K27ac_siCtl_IL6
GSM3587819
JC5071_H3K27ac_siFOXA1_PBS
GSM3587820
JC5072_H3K27ac_siFOXA1_IL6
GSM3587821
JC5073_H3K27ac_siCtl_PBS
GSM3587822
JC5074_H3K27ac_siCtl_IL6
GSM3587823
JC5075_H3K27ac_siFOXA1_PBS
GSM3587824
JC5076_H3K27ac_siFOXA1_IL6
GSM3587825
JC5077_H3K27ac_siCtl_PBS
GSM3587826
JC5078_H3K27ac_siCtl_IL6
GSM3587827
JC5079_H3K27ac_siFOXA1_PBS
GSM3587828
JC5080_H3K27ac_siFOXA1_IL6
GSM3587829
JC5081_H3K27ac_siCtl_PBS
GSM3587830
JC5082_H3K27ac_siCtl_IL6
GSM3587831
JC5083_H3K27ac_siFOXA1_PBS
GSM3587832
JC5084_H3K27ac_siFOXA1_IL6
GSM3587833
JC5085_Input_siCtl_PBS
GSM3587834
JC5086_Input_siFOXA1_IL6
GSM3587835
JC5087_Input_siCtl_IL6
GSM3587836
JC5088_Input_siFOXA1_PBS
GSM3587837
JC5089_Input_siCtl_PBS
GSM3587838
JC5090_Input_siFOXA1_IL6
GSM3587839
JC5091_Input_siCtl_IL6
GSM3587840
JC5092_Input_siFOXA1_PBS
GSM3587841
jc5554_pSTAT3_3840
GSM3587842
jc5555_pSTAT3_3487
GSM3587843
jc5572_ER_3840
GSM3587844
jc5573_ER_3487
GSM3587845
jc5583_FOXA1_3487
GSM3587846
jc5596_Input_3840
GSM3587847
jc5597_Input_3487
GSM4524017
jc6985_T47D_ATAC-seq_siCont_Veh
GSM4524018
jc6986_T47D_ATAC-seq_siCont_IL6
GSM4524019
jc6987_T47D_ATAC-seq_siFOXA1_Veh
GSM4524020
jc6988_T47D_ATAC-seq_siFOXA1_IL6
GSM4524021
jc6989_T47D_ATAC-seq_siCont_Veh
GSM4524022
jc6990_T47D_ATAC-seq_siCont_IL6
GSM4524023
jc6991_T47D_ATAC-seq_siFOXA1_Veh
GSM4524024
jc6992_T47D_ATAC-seq_siFOXA1_IL6
GSM4524025
jc6993_T47D_ATAC-seq_siCont_Veh
GSM4524026
jc6994_T47D_ATAC-seq_siCont_IL6
GSM4524027
jc6995_T47D_ATAC-seq_siFOXA1_Veh
GSM4524028
jc6996_T47D_ATAC-seq_siFOXA1_IL6
This SuperSeries is composed of the following SubSeries:
GSE126003
IL6/STAT3 co-opts ER/FOXA1 regulatory elements to drive metastasis in breast cancer (RNA-Seq)
GSE126004
IL6/STAT3 co-opts ER/FOXA1 regulatory elements to drive metastasis in breast cancer (ChIP-Seq)
GSE150131
IL6/STAT3 co-opts ER/FOXA1 regulatory elements to drive metastasis in breast cancer [ATAC-Seq]
Relations
BioProject
PRJNA518884
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary data files not provided
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