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Series GSE125088 Query DataSets for GSE125088
Status Public on Jan 16, 2019
Title Characterization of embryonic osteoclast precursors
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Embryonically established osteoclast precursors expressing tdTomato reporter gene were analyzed by single cell RNA-sequencing. Data showed that hematopoietic stem cell independent yolk-sac erythromyeloid progenitors produced embryonic osteoclast precursors.
Overall design Macrophage/ monocyte lineage cells isolated from E14.5 whole body were subjected to the sc RNA-seq. All samples included tdTomato expressing cells derived from E8.5 or E9.5 erythromyeloid progenitors in the yolk-sac.
Contributor(s) Alman BA, Yahara Y
Citation(s) 31907410
Submission date Jan 15, 2019
Last update date Sep 16, 2020
Contact name Yasuhito Yahara
Organization name Duke Univ
Street address Duke Hospital South, 200 Trent Drive, Orange Zone 5th floor
City Durham
State/province NC
ZIP/Postal code 27710
Country USA
Platforms (2)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM3562596 Cx3cr1_1
GSM3562597 Cx3cr1_2
GSM3562598 Csf1r_1
BioProject PRJNA515201
SRA SRP179470

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125088_Cx3cr1_Csf1r_new.barcodes.tsv.gz 185.8 Kb (ftp)(http) TSV
GSE125088_Cx3cr1_Csf1r_new.features.tsv.gz 272.8 Kb (ftp)(http) TSV
GSE125088_Cx3cr1_Csf1r_new.matrix.mtx.gz 423.2 Mb (ftp)(http) MTX
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Raw data are available in SRA
Processed data are available on Series record

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