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GEO accession:
Series GSE123743
Query DataSets for GSE123743
Status
Public on Aug 28, 2019
Title
Xist RNA-dependent Polycomb recruitment through the B and C repeats results in mild relaxation of X-linked transcriptional silencing
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
31456285
Submission date
Dec 12, 2018
Last update date
Sep 04, 2019
Contact name
Aurélie Bousard
E-mail(s)
aurelie.bousard@curie.fr
Organization name
Institut Curie
Street address
26, rue d'Ulm
City
Paris
ZIP/Postal code
75005
Country
France
Platforms (2)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
GPL24247
Illumina NovaSeq 6000 (Mus musculus)
Samples (21)
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GSM3510501
ChIPseq_H3K27me3_XistTetOP_delBC_D2_noDOX_Rep1
GSM3510502
ChIPseq_H3K27me3_XistTetOP_delBC_D2_noDOX_Rep2
GSM3510503
ChIPseq_H3K27me3_XistTetOP_delBC_D2_Dox_Rep1
GSM3510504
ChIPseq_H3K27me3_XistTetOP_delBC_D2_Dox_Rep2
GSM3510505
ChIPseq_H2AK119Ub_XistTetOP_delBC_D2_noDOX_Rep1
GSM3510506
ChIPseq_H2AK119Ub_XistTetOP_delBC_D2_noDOX_Rep2
GSM3510507
ChIPseq_H2AK119Ub_XistTetOP_delBC_D2_Dox_Rep1
GSM3510508
ChIPseq_H2AK119Ub_XistTetOP_delBC_D2_Dox_Rep2
GSM3510509
ChIPseq_Input_XistTetOP_delBC_D2_noDOX_Rep1
GSM3510510
RNAseq_XistTetOP_delBC_D2_noDox_Rep1
GSM3510511
RNAseq_XistTetOP_delBC_D2_noDox_Rep2
GSM3510512
RNAseq_XistTetOP_delBC_D2_Dox_Rep1
GSM3510513
RNAseq_XistTetOP_delBC_D2_Dox_Rep2
GSM3510514
RNAseq_XistTetOP_delA_D2_noDox_Rep1
GSM3510515
RNAseq_XistTetOP_delA_D2_noDox_Rep2
GSM3510516
RNAseq_XistTetOP_delA_D2_Dox_Rep1
GSM3510517
RNAseq_XistTetOP_delA_D2_Dox_Rep2
GSM3510518
RNAseq_XistTetOP_FL_D2_noDox_Rep1
GSM3510519
RNAseq_XistTetOP_FL_D2_noDox_Rep2
GSM3510520
RNAseq_XistTetOP_FL_D2_Dox_Rep1
GSM3510521
RNAseq_XistTetOP_FL_D2_Dox_Rep2
This SuperSeries is composed of the following SubSeries:
GSE123741
ChIPseq on H3K27me3 and H2AK119Ub on Xist-tetOP ΔB+C cell line, after 2 days of differentiation, with or without DOX induction
GSE123742
RNAseq on Xist-tetOP FL, ΔA, ΔB+C cell lines, with 2 days of differentiation, without or with DOX induction
Relations
BioProject
PRJNA509667
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE123743_RAW.tar
4.9 Gb
(http)
(custom)
TAR (of BIGWIG, TXT)
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