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Series GSE121612 Query DataSets for GSE121612
Status Public on Oct 01, 2019
Title Open Array Custom Real-time quantitative PCR analysis of mouse ileal mucosa
Organism Mus musculus
Experiment type Expression profiling by RT-PCR
Summary Germ-free wild-type mice (GFWT) were inoculated with the commensal CEC (CECWT) or probiotic Nissle 1917 (NissleWT) E. coli strain. Mono-colonized mice, CECWT and NissleWT, were sacrificed 21 days post-inoculation and the ileal and colonic gene expression profiles analyzed by high-throughput qPCR using TaqMan OpenArrays.
 
Overall design qPCR gene expression profiling. Ileal mucosafrom germfree mice were used as control. Equal amount total RNA from each mouse was pooled prior to gene expression analysis.
 
Contributor(s) Escribano-Vazquez U
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Submission date Oct 22, 2018
Last update date Oct 01, 2019
Contact name Unai Escribano Vazquez
E-mail(s) unai.escribano-vazquez@inra.fr
Phone 761240351
Organization name INRA
Department MICALIS
Street address Domaine de Vilvert Bat 440
City Jouy en Josas, France
State/province --- Sélectionner ---
ZIP/Postal code 78352
Country France
 
Platforms (1)
GPL25707 TaqMan OpenArray Real-time PCR System II
Samples (36)
GSM3440073 ANC_C10I
GSM3440074 ANC_C1I
GSM3440075 ANC_C2I
Relations
BioProject PRJNA497871

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121612_non-normalized.txt.gz 34.2 Kb (ftp)(http) TXT
Processed data included within Sample table

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