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Series GSE121556 Query DataSets for GSE121556
Status Public on May 17, 2019
Title Genome-wide assessment of H4K20me1 chromatin profile in D458 shNull and shSETD8 medulloblastoma cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary The goal of this study was to examine the H4K20me1 profile in medulloblastoma cells with wild type SETD8 or depleted SETD8.
Overall design to determine how the H4K20me1 landscape changed in response to SETD8 depletion.
Contributor(s) Veo B, Danis E
Citation(s) 30626740
Submission date Oct 22, 2018
Last update date May 17, 2019
Contact name Rajeev Vibhakar
Organization name University of Colorado Anschutz Medical Campus
Department Pediatrics/Hematology/Oncology
Street address 12800 E 19th Ave., P18-4402D
City Aurora
State/province CO
ZIP/Postal code 80045
Country USA
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (4)
GSM3439189 D458-input
GSM3439190 D458-IgG
GSM3439191 D458-H4K20me1
BioProject PRJNA497788
SRA SRP166269

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121556_RAW.tar 1.4 Gb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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