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Series GSE121495 Query DataSets for GSE121495
Status Public on Oct 30, 2020
Title Genomic and Epigenomic EBF1 Alterations Modulate TERT Expression in Gastric Cancer [ChIP-Seq - EBF1, EZH2]
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Multiple convergent pathways resulting in inhibition of the transcription factor EBF1 is a major cause of TERT upregulation.
Overall design NanoChIP-seq, Capture-C, CapStarr-Seq and TF-ChIPSeq were integrated to study the regulation mechanisms of EBF1 and TERT expression in gastric cancer.
Contributor(s) Xing M, Ooi W, Tan P
Citation(s) 34635154
Submission date Oct 18, 2018
Last update date Nov 03, 2021
Contact name Wen Fong Ooi
Organization name Genome Institute of Singapore
Street address 60 Biopolis
City Singapore
ZIP/Postal code 470110
Country Singapore
Platforms (2)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (6)
GSM3438223 HS746T_EBF1
GSM3438224 HS746T_Input
GSM3438225 YCC11_EBF1
This SubSeries is part of SuperSeries:
GSE121140 Genomic and Epigenomic EBF1 Alterations Modulate TERT Expression in Gastric Cancer
BioProject PRJNA497465
SRA SRP166124

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121495_RAW.tar 2.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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