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Series GSE119964 Query DataSets for GSE119964
Status Public on Apr 30, 2019
Title Exploring the in vivo role of the mitochondrial calcium uniporter in brown fat bioenergetics
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The mitochondrial calcium uniporter has been proposed to coordinate the organelle’s energetics with cytosolic calcium signaling. Previous studies have shown that the uniporter current is extremely high in mitochondria from brown adipose tissue (BAT), yet the contribution of the uniporter to BAT physiology in vivo is not known. Here, we report the generation and characterization of a mouse model lacking Mcu, the pore forming subunit of the uniporter, specifically in BAT (BAT-Mcu-KO). BAT-Mcu-KO mice are born in Mendelian ratios on a C57BL6/J genetic background, without any overt phenotypes. Although uniporter based calcium uptake is selectively ablated in BAT mitochondria, these mice are able to defend their body temperature in response to cold challenge and exhibit a normal body weight trajectory on a high fat diet. BAT transcriptional profiles at baseline and following cold-challenge are intact and not impacted by loss of Mcu. Unexpectedly, we found that cold powerfully activates the ATF4-dependent integrated stress response in BAT, and increases both circulating FGF21 and GDF15 levels, raising the hypothesis that the integrated stress response partly underlies the pleiotropic effects of BAT on systemic metabolism. Our study demonstrates that the uniporter is largely dispensable for BAT thermogenesis, and unexpectedly, uncovers a striking activation of the integrated stress response of BAT to cold challenge.
 
Overall design RNA-seq was performed on BAT RNA isolated from BAT-Mcu-KO and control animals housed for 6 hours at 4C or room temp (RT). Samples include 6 control animals at RT; 5 control animals at 4C; 6 BAT-Mcu-KO animals at RT; and 6 BAT-Mcu-KO animals at 4C.
 
Contributor(s) Flicker D, Sancak Y, Mick E, Goldberger O, Mootha VK
Citation(s) 31042465
Submission date Sep 14, 2018
Last update date May 26, 2020
Contact name Daniel Flicker
E-mail(s) flicker@fas.harvard.edu
Organization name Massachusetts General Hospital
Department Molecular Biology
Lab Vamsi Mootha
Street address Department of Molecular Biology, 185 Cambridge Street, 6th floor
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (23)
GSM3389541 Ctrl RT #1
GSM3389542 Ctrl RT #2
GSM3389543 Ctrl RT #3
Relations
BioProject PRJNA490843
SRA SRP161759

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE119964_flicker_foldchange.csv.gz 1.7 Mb (ftp)(http) CSV
GSE119964_flicker_normcounts.csv.gz 1.7 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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