NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE119372 Query DataSets for GSE119372
Status Public on Sep 26, 2018
Title ATAC-seq data from naïve Tregs, memory Tregs and CD161+ Tregs
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We analyze open chromatin regions of three populations of human Tregs
 
Overall design CD4+CD25+ cells were isolated from peripheral blood of three healthy donors and then cell sorted to CD4+CD25hiCD127loCD45RA+ (naïve), CD4+CD25hiCD127loCD45RA-CD161- (memory) and CD4+CD25hiCD127loCD45RA-CD161+ Tregs, then open chromatin regions analyzed by ATAC-seq
 
Contributor(s) Povoleri G, Pirooznia M
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Sep 03, 2018
Last update date Mar 27, 2019
Contact name Mehdi Pirooznia
E-mail(s) pirooznia@gmail.com
Phone 410-340-6052
Organization name National Institutes of Health
Street address 12 SOUTH DR
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (9)
GSM3373878 Donor1_naive Tregs [S02]
GSM3373879 Donor1_memory Tregs [S03]
GSM3373880 Donor1_CD161+ Tregs [S04]
This SubSeries is part of SuperSeries:
GSE119375 Analysis of transcriptomes and open chromatin regions of sub-populations of human Tregs
Relations
BioProject PRJNA489004
SRA SRP159456

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE119372_RAW.tar 10.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap