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GEO accession:
Series GSE119309
Query DataSets for GSE119309
Status
Public on Aug 31, 2021
Title
Aberrant chromatin landscape upon loss of the H3.3 chaperone Daxx leads to Pu.1-mediated neutrophilia and inflammation
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34876685
Submission date
Aug 31, 2018
Last update date
Jan 11, 2022
Contact name
Paolo Salomoni
E-mail(s)
paolo.salomoni@dzne.de
Organization name
DZNE e.V.
Street address
Sigmund-Freud-Str. 27
City
Bonn
ZIP/Postal code
53127
Country
Germany
Platforms (3)
GPL18480
Illumina HiSeq 1500 (Mus musculus)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL24247
Illumina NovaSeq 6000 (Mus musculus)
Samples (145)
Less...
More...
GSM3369647
Daxx +/+ LT.HSC 1
GSM3369648
Daxx +/+ LT.HSC 2
GSM3369649
Daxx F/F LT.HSC 1
GSM3369650
Daxx F/F LT.HSC 2
GSM3369655
Daxx +/+ CMP 1
GSM3369656
Daxx +/+ CMP 2
GSM3369657
Daxx F/F CMP 1
GSM3369658
Daxx F/F CMP 2
GSM3369659
Daxx +/+ GMP 1
GSM3369660
Daxx +/+ GMP 2
GSM3369661
Daxx F/F GMP 1
GSM3369662
Daxx F/F GMP 2
GSM3369667
Daxx +/+ KLS 1 [3421]
GSM3369668
Daxx +/+ KLS 2 [3422]
GSM3369669
Daxx F/F KLS 1 [3423]
GSM3369670
Daxx F/F KLS 2 [3424]
GSM3369671
Daxx +/+ GMP 1 [3425]
GSM3369672
Daxx +/+ GMP 2 [3426]
GSM3369673
Daxx F/F GMP 1 [3427]
GSM3369674
Daxx F/F GMP 2 [3428]
GSM5137300
Daxx +/+ LT.HSC 3dpi 1
GSM5137301
Daxx +/+ LT.HSC 3dpi 2
GSM5137302
Daxx F/F LT.HSC 3dpi 1
GSM5137303
Daxx F/F LT.HSC 3dpi 2
GSM5137304
Daxx F/F LT.HSC 3dpi 3
GSM5137305
Daxx F/F KLS 3wpi 1
GSM5137306
Daxx F/F KLS 3wpi 2
GSM5137307
Daxx F/F KLS 3wpi 3
GSM5137308
Daxx +/+ KLS 3wpi 1
GSM5137309
Daxx F/F Pu.1 F/F KLS 3wpi 1
GSM5137310
Daxx F/F Pu.1 F/F KLS 3wpi 2
GSM5137311
Daxx +/+ KLS 3wpi 2
GSM5137312
Daxx +/F LTHSC 1
GSM5137313
Daxx +/F LTHSC 2
GSM5137314
Daxx +/+ LTHSC 1
GSM5137315
Daxx F/F LTHSC 1
GSM5137316
Daxx +/+ LTHSC 2
GSM5137317
Daxx F/F LTHSC 2
GSM5137318
Daxx F/F LTHSC 3
GSM5137319
Daxx F/F KLS 3wpi 1 Lo22
GSM5137320
Daxx F/F KLS 3wpi 2 Lo23
GSM5137321
Daxx F/F KLS 3wpi 3 Lo24
GSM5137322
Daxx +/+ KLS 3wpi 1 Lo52
GSM5137323
Daxx +/+ KLS 3wpi 2 Lo53
GSM5137324
Daxx F/F Pu.1 F/F KLS 3wpi 1 Lo54
GSM5137325
Daxx F/F Pu.1 F/F KLS 3wpi 2 Lo56
GSM5137326
Daxx +/+ KLS 3wpi 3
GSM5137327
Daxx F/F GMP 3wpi 1
GSM5137328
Daxx F/F GMP 3wpi 2
GSM5137329
Daxx F/F GMP 3wpi 3
GSM5137330
Daxx +/+ GMP 3wpi 1
GSM5137331
Daxx +/+ GMP 3wpi 2
GSM5137332
Daxx F/F Pu.1 F/F GMP 3wpi 1
GSM5137333
Daxx F/F Pu.1 F/F GMP 3wpi 2
GSM5137334
Daxx +/+ GMP 3wpi 3
GSM5137335
Pu.1 +/+ KLS 1
GSM5137336
Pu.1 +/+ KLS 2
GSM5137337
Pu.1 F/F KLS 1
GSM5137338
Pu.1 F/F KLS 2
GSM5137339
Pu.1 +/+ GMP 1
GSM5137340
Pu.1 +/+ GMP 2
GSM5137341
Pu.1 F/F GMP 1
GSM5137342
Pu.1 F/F GMP 2
GSM5137343
Daxx +/+ MPP3 1
GSM5137344
Daxx +/+ MPP3 2
GSM5137345
Daxx F/F MPP3 1
GSM5137346
Daxx F/F MPP3 2
GSM5137347
Daxx +/+ MPP4 1
GSM5137348
Daxx +/+ MPP4 2
GSM5137349
Daxx F/F MPP4 1
GSM5137350
Daxx F/F MPP4 2
GSM5137351
Daxx +/+ KLS 24wpi 1
GSM5137352
Daxx +/+ KLS 24wpi 2
GSM5137353
Daxx F/F KLS 24wpi 1
GSM5137354
Daxx F/F KLS 24wpi 2
GSM5137355
Daxx F/F Pu.1 F/F KLS 24wpi 1
GSM5137356
Daxx F/F Pu.1 F/F KLS 24wpi 2
GSM5137357
Daxx +/+ GMP 24wpi 1
GSM5137358
Daxx +/+ GMP 24wpi 2
GSM5137359
Daxx F/F GMP 24wpi 1
GSM5137360
Daxx F/F GMP 24wpi 2
GSM5137361
Daxx F/F Pu.1 F/F GMP 24wpi 1
GSM5137362
Daxx F/F Pu.1 F/F GMP 24wpi 2
GSM5137363
Daxx +/+ 3wpi H3.3 1
GSM5137364
Daxx +/+ 3wpi Pu.1 1
GSM5137365
Daxx +/+ 3wpi H3K9me3 1
GSM5137366
Daxx +/+ 3wpi H3K27ac 1
GSM5137367
Daxx +/+ 3wpi H3.3 2
GSM5137368
Daxx +/+ 3wpi Pu.1 2
GSM5137369
Daxx +/+ 3wpi H3K9me3 2
GSM5137370
Daxx +/+ 3wpi H3K27ac 2
GSM5137371
Daxx F/F 3wpi H3.3 1
GSM5137372
Daxx F/F 3wpi Pu.1 1
GSM5137373
Daxx F/F 3wpi H3K9me3 1
GSM5137374
Daxx F/F 3wpi H3K27ac 1
GSM5137375
Daxx F/F 3wpi H3.3 2
GSM5137376
Daxx F/F 3wpi Pu.1 2
GSM5137377
Daxx F/F 3wpi H3K9me3 2
GSM5137378
Daxx F/F 3wpi H3K27ac 2
GSM5137379
Daxx +/+ 8wpi H3K9me3 1
GSM5137380
Daxx +/+ 8wpi H3K27me3 1
GSM5137381
Daxx +/+ 8wpi H3K9me3 2
GSM5137382
Daxx +/+ 8wpi H3K27me3 2
GSM5137383
Daxx +/+ 8wpi H3K9me3 3
GSM5137384
Daxx +/+ 8wpi H3K27me3 3
GSM5137385
Daxx F/F 8wpi H3K9me3 1
GSM5137386
Daxx F/F 8wpi H3K27me3 1
GSM5137387
Daxx F/F 8wpi H3K9me3 2
GSM5137388
Daxx F/F 8wpi H3K27me3 2
GSM5137389
Daxx F/F 8wpi H3K9me3 3
GSM5137390
Daxx F/F 8wpi H3K27me3 3
GSM5137391
Daxx F/F Pu.1 F/F 8wpi H3K9me3 1
GSM5137392
Daxx F/F Pu.1 F/F 8wpi H3K27me3 1
GSM5137393
Daxx F/F Pu.1 F/F 8wpi H3K9me3 2
GSM5137394
Daxx F/F Pu.1 F/F 8wpi H3K27me3 2
GSM5137395
Daxx F/F Pu.1 F/F 8wpi H3K9me3 3
GSM5137396
Daxx F/F Pu.1 F/F 8wpi H3K27me3 3
GSM5137397
Daxx +/+ 24wpi H3.3 1
GSM5137398
Daxx +/+ 24wpi Pu.1 1
GSM5137399
Daxx +/+ 24wpi H3K27ac 1
GSM5137400
Daxx +/+ 24wpi H3K9me3 1
GSM5137401
Daxx +/+ 24wpi H3K27me3 1
GSM5137402
Daxx +/+ 24wpi H3.3 2
GSM5137403
Daxx +/+ 24wpi Pu.1 2
GSM5137404
Daxx +/+ 24wpi H3K27ac 2
GSM5137405
Daxx +/+ 24wpi H3K9me3 2
GSM5137406
Daxx +/+ 24wpi H3K27me3 2
GSM5137407
Daxx F/F 24wpi H3.3 1
GSM5137408
Daxx F/F 24wpi Pu.1 1
GSM5137409
Daxx F/F 24wpi H3K27ac 1
GSM5137410
Daxx F/F 24wpi H3K9me3 1
GSM5137411
Daxx F/F 24wpi H3K27me3 1
GSM5137412
Daxx F/F 24wpi H3.3 2
GSM5137413
Daxx F/F 24wpi Pu.1 2
GSM5137414
Daxx F/F 24wpi H3K27ac 2
GSM5137415
Daxx F/F 24wpi H3K9me3 2
GSM5137416
Daxx F/F 24wpi H3K27me3 2
GSM5137417
Daxx F/F Pu.1 F/F 24wpi H3.3 1
GSM5137418
Daxx F/F Pu.1 F/F 24wpi H3K27ac 1
GSM5137419
Daxx F/F Pu.1 F/F 24wpi H3K9me3 1
GSM5137420
Daxx F/F Pu.1 F/F 24wpi H3K27me3 1
GSM5137421
Daxx F/F Pu.1 F/F 24wpi H3.3 2
GSM5137422
Daxx F/F Pu.1 F/F 24wpi H3K27ac 2
GSM5137423
Daxx F/F Pu.1 F/F 24wpi H3K9me3 2
GSM5137424
Daxx F/F Pu.1 F/F 24wpi H3K27me3 2
This SuperSeries is composed of the following SubSeries:
GSE119306
Aberrant chromatin landscape upon loss of the H3.3 chaperone Daxx leads to Pu.1-mediated neutrophilia and inflammation [ATAC-Seq]
GSE119308
Aberrant chromatin landscape upon loss of the H3.3 chaperone Daxx leads to Pu.1-mediated neutrophilia and inflammation [RNA-Seq]
GSE168367
Aberrant chromatin landscape upon loss of the H3.3 chaperone Daxx leads to Pu.1-mediated neutrophilia and inflammation [CUT&Tag]
Relations
BioProject
PRJNA488717
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