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Series GSE118716 Query DataSets for GSE118716
Status Public on Dec 11, 2019
Title Epigenetic reprogramming at estrogen-receptor binding sites alters 3D chromatin landscape in endocrine resistant breast cancer
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 31949157, 38448820
Submission date Aug 17, 2018
Last update date Mar 13, 2024
Contact name Joanna Achinger-Kawecka
E-mail(s) joanna.achinger@adelaide.edu.au
Organization name South Australian Immunogenomics Cancer Institute
Street address AHMS Building, North Terrace
City Adelaide
State/province SA
ZIP/Postal code 5005
Country Australia
 
Platforms (3)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (40)
GSM3336876 MCF7_H2AZac_ChIP-seq
GSM3336877 TAMR_H2AZac_ChIP-seq
GSM3336878 FASR_H2AZac_ChIP-seq
This SuperSeries is composed of the following SubSeries:
GSE118711 Epigenetic reprogramming at estrogen-receptor binding sites alters the 3D chromatin landscape in endocrine resistant breast cancer [ChIP-seq]
GSE118712 Epigenetic reprogramming at estrogen-receptor binding sites alters the 3D chromatin landscape in endocrine resistant breast cancer [Hi-C]
GSE118713 Epigenetic reprogramming at estrogen-receptor binding sites alters the 3D chromatin landscape in endocrine resistant breast cancer [RNA-seq]
Relations
BioProject PRJNA486524

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118716_RAW.tar 25.0 Gb (http)(custom) TAR (of BB, BW, HIC, TXT, VCF)
SRA Run SelectorHelp

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