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Series GSE118566 Query DataSets for GSE118566
Status Public on Aug 16, 2018
Title Ex Vivo Lung Perfusion as a Human Platform for Preclinical Small Molecule Testing
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We report mRNA expression from human lung homogenate samples taken during Ex Vivo Lung Perfusion during an acute challenge with LPS and an intervention with the small molecule BC1215
Overall design Examination of tissue gene expression changes in response to LPS and the effect of BC 1215 on this LPS response
Contributor(s) Weathington NM, Radder JE, Rojas M
Citation(s) 30282819
Submission date Aug 15, 2018
Last update date Dec 23, 2018
Contact name Josiah Radder
Organization name University of Pittsburgh
Department Pulmonary, Allergy, and Critical Care Medicine
Street address 200 Lothrop St
City Pittsburgh
State/province Pennsylvania
ZIP/Postal code 15224
Country USA
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (12)
GSM3333307 Pre LPS (time 0h) 1
GSM3333308 Pre LPS (time 0h) 2
GSM3333309 Pre LPS (time 0h) 3
BioProject PRJNA486099
SRA SRP157975

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118566_gene_exp.diff.gz 5.4 Mb (ftp)(http) DIFF
GSE118566_genes.count_tracking.txt.gz 1.3 Mb (ftp)(http) TXT
GSE118566_genes.fpkm_tracking.gz 2.5 Mb (ftp)(http) FPKM_TRACKING
GSE118566_genes.read_group_tracking.txt.gz 5.8 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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