GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE118333 Query DataSets for GSE118333
Status Public on Aug 01, 2021
Title Investigation of SNHG1 functions in neuroblastoma
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The gene expression profiles of SK-N-BE(2)C cell lines with CRISPR/Cas9-mediated depletion of SNHG1 were perfomed to investigate the role of SNHG1 in neuroblastoma
Overall design RNA were extracted from SK-N-BE(2)C cell lines with CRISPR/Cas9-mediated depletion of SNHG1and then profiled by sequencing.
Contributor(s) Juan HF, Lin SH, Hsu CL
Citation(s) 36130928
Submission date Aug 09, 2018
Last update date Sep 27, 2022
Contact name Chia-Lang Hsu
Organization name National Taiwan University Hospital
Department Department of Medical Research
Street address No. 7, Zhongshan S. Rd.
City Taipei
ZIP/Postal code 100
Country Taiwan
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (9)
GSM3325453 Control rep1
GSM3325454 Control rep2
GSM3325455 Control rep3
BioProject PRJNA485246
SRA SRP156858

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118333_normalized_CPM.txt.gz 1.6 Mb (ftp)(http) TXT
GSE118333_read_count.txt.gz 673.0 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap